Job Description P16384 Confidence 97.31% Date Thu Jan 5 11:35:04 GMT 2012 Rank 122 Aligned Residues 166 % Identity 17% Template c1iqpF_ PDB info PDB header:replication Chain: F: PDB Molecule:rfcs; PDBTitle: crystal structure of the clamp loader small subunit from2 pyrococcus furiosus Resolution 2.80 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.						.	.	40	.	.	.	.							.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.								.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.								.	.	.	.	.	.
Query Sequence		K	A	S	L	P	K	A	I	F	L	M	G	P	T	A	S	G	K	T	A	L	A	I	E	L	R	K	I	L	P	V	E	.	.	.	.	.	L	I	S	V	D	S	A	.	.	.	.	.	.	L	I	Y	K	G	M	D	I	G	T	A	K	P	N	A	E	E	L	L	A	A	P	H	R	L	L	D	I	R	D
Query Conservation																																		.	.	.	.	.								.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.								.	.	.	.	.	.															.	.	.	.
Template Conservation																																																																		.	.	.	.
Template Sequence		K	T	G	S	M	P	H	L	L	F	A	G	P	P	G	V	G	K	T	T	A	A	L	A	L	A	R	E	L	F	G	E	N	W	R	H	N	F	L	E	L	N	A	S	D	E	R	G	I	N	V	I	R	E	K	V	K	E	F	A	R	T	K	P	.	.	.	.	I	G	G	A	S	F	K	I	I	F	L	D
Template Known Secondary structure		T	T	T									S		T	T	S	S	T	T												G	G	G										T	T	T	S	S													T	T	S			.	.	.	.	S	S	S		S
Template Predicted Secondary structure																																																																		.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.					.	.	.	.	110	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.							.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.
Query Sequence		P	S	Q	A	Y	S	A	A	D	F	R	R	D	A	L	A	E	M	A	D	I	T	A	A	G	R	I	P	L	L	V	G	G	.	.	.	.	.	.	T	M	L	Y	F	K	A	L	L	E	G	L	S	P	L	P	S	A	D	P	E	V	R	A	R	I	E	Q	Q	A	A	E	Q	G	W	E	S	L	H	R	Q
Query Conservation																																			.	.	.	.	.	.
Alig confidence								.	.	.	.																								.	.	.	.	.	.
Template Conservation								.	.	.	.
Template Sequence		E	A	D	A	L	T	.	.	.	.	Q	D	A	Q	Q	A	L	R	R	T	M	E	M	F	S	S	N	V	R	F	I	L	S	C	N	Y	S	S	K	I	I	E	P	I	Q	S	R	C	A	I	F	R	F	R	P	L	R	D	E	D	I	A	K	R	L	R	Y	I	A	E	N	E	G	L	E	L	T	E	E	G
Template Known Secondary structure		T	G	G	G	S		.	.	.	.														T	T	T	T								S		G	G	G	S						T	T																										T
Template Predicted Secondary structure								.	.	.	.
Template SS confidence
		118	.	120	.	.	.					.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	E	V	D	P	V	A	A	A	R	I	H	P	N	D	P	Q	R	L	S	R	A	L	E	V	F	F	I	S	G	K	T	L	T	E
Query Conservation
Alig confidence						.	.	.	.	.
Template Conservation						.	.	.	.	.
Template Sequence		L	Q	A	I	.	.	.	.	.	L	Y	I	A	E	G	D	M	R	R	A	I	N	I	L	Q	A	A	A	A	L	D	K	K	I	T	D
Template Known Secondary structure						.	.	.	.	.					T	T														T	T		S
Template Predicted Secondary structure						.	.	.	.	.
Template SS confidence
		194	.	.	.						.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions