 |
Job Description | P06959 | Confidence | 99.46% | Date | Thu Jan 5 10:59:28 GMT 2012 |
Rank | 23 | Aligned Residues | 77 |
% Identity | 23% | Template | d1pmra_ |
SCOP info | Barrel-sandwich hybrid
| Single hybrid motif
| Biotinyl/lipoyl-carrier proteins and domains
|
Resolution | UNK |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | |
|
. | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |
|
|
|
|
|
|
|
|  |  | . | . |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | I | E | I | K | V | P | D | I | G | A | D | E | V | E | . |
. |
I | T | E | I | L | V | K | V | G | D | K | V | E | A | E | Q | S | L | I | T | V | E | G | D | K | A | S | M | E | V | P | S | P | Q | A | G | I | V | K | E | I | K | V | S | V | G | D | K | T | Q | T | G | A | L | I | M | I | F | D | S | A | D |
Query Conservation |   |
  |   |   |   |   |   |
|   |
|
|   |   |   |   |
| . | . |
|   |   |   |   |
|
|   |
|
|   |
|   |   |   |   |   |
|   |   |
|
|
|   |
|   |   |
|
|
|   |
|   |
|
|
|   |
|   |   |
|   |
|   |
|
|
|   |
|
|   |
|
|
|
|
|   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |
|   |   |
|   |   |   |   |   |
|   |
|   |   |
|   |
|   |   |
|
|   |
|   |   |
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |
|   |
|
|   |   |
|   |
|   |   |
|   |
|   |   |
|   |   |
|   |   |
|   |   |
|   |   |
|
|   |   |   |
Template Sequence |   |
S | V | D | I | L | V | P | D | L | P | E | S | V | A | D | A | T | V | A | T | W | H | K | K | P | G | D | A | V | V | R | D | E | V | L | V | E | I | E | T | D | K | V | V | L | E | V | P | A | S | A | D | G | I | L | D | A | V | L | E | D | E | G | T | T | V | T | S | R | Q | I | L | G | R | L | R | E | G | N |
Template Known Secondary structure |   |
|
|
|  |  |
|
|
|
|
| S |
|
| S |
|  |  |
|
| B |
|
|
|
| T | T |
|
| B | S | S | S |
|
| B |
| B |
|
| S | S | S |
|
|
|
|
| B |
|
| S | B |
|
|
|
| B |
| T | T |
| T | T |
|  |  |
| S | S | S |  |  |  | B |
|
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|