Job Description P06959 Confidence 98.69% Date Thu Jan 5 10:59:28 GMT 2012 Rank 50 Aligned Residues 147 % Identity 20% Template c3h9iB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:cation efflux system protein cusb; PDBTitle: crystal structure of the membrane fusion protein cusb from escherichia2 coli Resolution 3.40 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																									.																				.
Query SS confidence																									.																				.
Query Sequence		I	T	E	I	L	V	K	V	G	D	K	V	E	A	E	Q	S	L	I	T	V	E	G	.	D	K	A	S	M	E	V	P	S	P	Q	A	G	I	V	K	E	I	K	.	V	S	V	G	D	K	T	Q	T	G	A	L	I	M	I	F	D	S	A	D	G	A	A	D	A	A	P	A	Q	A	E	E	K	K	E	A
Query Conservation																									.																				.
Alig confidence																									.																				.																			.	.	.	.
Template Conservation																																																																.	.	.	.
Template Sequence		V	K	T	A	T	V	T	R	G	P	L	T	F	A	Q	S	F	P	A	N	V	S	Y	N	E	Y	Q	Y	A	I	V	Q	A	R	A	A	G	F	I	D	K	V	Y	P	L	T	V	G	D	K	V	Q	K	G	T	P	L	L	D	L	T	I	.	.	.	.	P	D	W	V	E	A	Q	S	E	Y	L	L	L	R
Template Known Secondary structure								B																B		T	T									S									S			S	S					T	T									.	.	.	.
Template Predicted Secondary structure																																																																.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.					.	.	.	.	160	.	.	.	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	A	A	A	P	A	A	A	A	A	K	D	V	N	V	P	D	I	G	S	D	E	V	E	V	T	E	I	L	V	K	V	G	D	K	V	E	A	E	Q	S	L	I	T	V	E	G	D	K	A	S	M	E	V	P	A	P	F	A	G	T	V	K	E	I	K	V	N	V	G	D	K	V	S	T	G	S	L	I
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	T	G	G	T	A	T	Q	T	E	G	I	L	E	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	F	E	V	A	G	E	A	G	A	A	A	P	A	A	K	Q	E	A	A	P	A	A	A	P	A	P	A	A	G	V	K	E	V	N	V	P	D	I	G	G	D	E	V	E	V	T	E	V	M	V	K	V	G	D	K	V	A	A	E	Q	S	L	I	T	V	E	G	D	K	A	S	M	E	V	P	A	P	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	A	G	M	P	E	A	D	I	R	R	L	I	A	T	Q	K	I	Q	T	R	F	T	L	K	A	P	I
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T																								S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																					186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	V	V	K	E	L	K	V	N	V	G	D	K	V	K	T	G	S	L	I	M	I	F	E	V	E	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	V	I	T	A	F	D	L	R	A	G	M	N	I	A	K	D	N	V	V	A	K	I	Q	G	M	D
Template Known Secondary structure						S						S	S					S											S
Template Predicted Secondary structure
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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