Job Description P06959 Confidence 98.89% Date Thu Jan 5 10:59:28 GMT 2012 Rank 46 Aligned Residues 150 % Identity 19% Template c3fppB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:macrolide-specific efflux protein maca; PDBTitle: crystal structure of e.coli maca Resolution 2.99 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	G	D	K	V	E	A	E	Q	S	L	I	T	V	E	G	D	K	A	S	M	E	V	P	S	P	Q	A	G	I	V	K	E	I	K	V	S	V	G	D	K	T	Q	T	G	A	L	I	M	I	F	D	S	A	D	G	A	A	D	A	A	P	A	Q	A	E	E	K	K	E	A	A	P	A	A	A	P	A	A
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		R	P	G	D	L	Q	Q	S	V	L	A	T	G	K	L	D	A	L	R	.	K	V	D	V	G	A	Q	V	S	G	Q	L	K	T	L	S	V	A	I	G	D	K	V	K	K	D	Q	L	L	G	V	I	D	P	E	Q	A	E	N	Q	I	K	E	V	E	A	T	L	M	E	L	R	A	Q	R	Q	Q	A	E	A
Template Known Secondary structure																					.							S	S											T	T		B			T	T
Template Predicted Secondary structure																					.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		103	.	.	.	.	.	.	110	.	.	.	.	.	.																				.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	A	K	D	V	N	V	P	D	I	G	S	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	E	V	T	E	I	L	V	K	V	G	D	K	V	E	A	E	Q	S	L	I	T	V	E	G	D	K	A	S	M	E	V	P	A	P	F	A	G	T	V	K	E	I	K	V	N
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	K	L	A	R	V	T	Y	S	R	Q	Q	R	L	A	Q	T	Q	A	V	S	Q	Q	D	L	D	N	A	A	T	E	M	A	V	K	Q	A	Q	I	G	T	I	D	A	Q	I	K	R	N	Q	A	S	L	D	T	A	K	T	N	L	D	Y	T	R	I	V	A	P	M	A	G	E	V	T	Q	I	T	T	L
Template Known Secondary structure																			S			S	T	T								T																																T	T					S	S		S	B						S
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		164	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	D	K	V	S	T	G	S	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	G	Q	T	V	I	A	A	Q	Q
Template Known Secondary structure		S	S						S	S	S
Template Predicted Secondary structure
Template SS confidence
		201	.	.	.	.	.	.	.	.	210

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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