Job Description P06959 Confidence 82.52% Date Thu Jan 5 10:59:28 GMT 2012 Rank 78 Aligned Residues 158 % Identity 14% Template c2jgpA_ PDB info PDB header:ligase Chain: A: PDB Molecule:tyrocidine synthetase 3; PDBTitle: structure of the tycc5-6 pcp-c bidomain of the tyrocidine2 synthetase tycc Resolution 1.85 Å

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		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.						.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure																																		.	.	.	.	.
Query SS confidence																																		.	.	.	.	.
Query Sequence		L	P	W	P	K	V	D	F	S	K	F	G	E	I	E	E	V	E	L	G	R	I	Q	K	I	S	G	A	N	L	S	R	.	.	.	.	.	N	W	V	M	I	P	H	V	T	H	F	D	K	T	D	I	T	E	L	E	A	F	R	K	Q	Q	N	E	E	A	A	K	R	K	L	D	V	K	I	T	P	V	V
Query Conservation																																		.	.	.	.	.
Alig confidence																																		.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	G	N	V	F	S	I	E	P	V	Q	K	Q	A	Y	Y	P	V	S	S	A	Q	K	R	M	Y	I	L	D	Q	F	E	G	V	G	I	S	Y	N	M	P	S	T	M	L	I	E	G	K	L	E	R	T	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T	B	T	T									S	S																	T			T	T	T	T	B																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	M	K	A	V	A	A	A	L	E	Q	M	P	R	F	N	S	S	L	S	E	D	G	Q	R	L	T	L	K	K	Y	I	N	I	G	V	A	V	D	T	P	N	G	L	V	V	P	V	F	K	D	V	N	K	K	G	I	I	E	L	S	R	E	L	M	T	I	S	K	K	A	R	D	G	K	L	T	A	G
Query Conservation
Alig confidence		.	.																																						.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																						.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	E	A	A	F	Q	R	L	I	A	R	H	E	S	L	R	T	S	F	A	V	V	N	G	E	P	V	Q	N	I	H	E	D	V	P	F	A	L	.	.	.	.	.	.	.	.	.	A	Y	S	E	V	T	E	E	E	A	R	E	L	V	S	S	L	V	.	.	.	.	.	.	.	.	.	.	.	Q	P	F
Template Known Secondary structure		.	.												G	G	G	G							T	T								S							.	.	.	.	.	.	.	.	.																	T		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.																																						.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.										.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.												.	.	.
		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	Q	G	G	C	F	T	I	S	S	I	G	G	L	G	T	T	H	F	A	P	I	V	N	A	P	E	V	A	I	L	G	V	S	K	S	A	M	E	P	V	W	N	G	K	E	F	V	P	R	L	M	L	P	I	S	L	S	F	D	H	R	V	I	D	G	A	D	G	A	R	F	I	T	I	I	N	N	T
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	E	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	I	R	V	S	L	L	K	I	G	E	D	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	V	L	F	T	D	M	H	H	S	I	S	D	G	V	S	S	G	I	L	L	A	E	W	V	Q	L
Template Known Secondary structure			T	T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.								B	G	G	G
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		197	.	.	200	.																					.	.	.	.	.	.	.	.	210	.	.	.	.	.															.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		622	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	Q	G
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		243	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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