Job Description P06959 Confidence 100.00% Date Thu Jan 5 10:59:28 GMT 2012 Rank 3 Aligned Residues 230 % Identity 33% Template c2ii4C_ PDB info PDB header:transferase Chain: C: PDB Molecule:lipoamide acyltransferase component of branched-chain PDBTitle: crystal structure of a cubic core of the dihydrolipoamide2 acyltransferase (e2b) component in the branched-chain alpha-ketoacid3 dehydrogenase complex (bckdc), coenzyme a-bound form Resolution 2.59 Å

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		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	I	E	E	V	E	L	G	R	I	Q	K	I	S	G	A	N	L	S	R	N	W	V	M	I	P	H	V	T	H	F	D	K	T	D	I	T	E	L	E	A	F	R	K	Q	Q	N	E	E	A	A	K	R	K	L	D	V	K	I	T	P	V	V	F	I	M	K	A	V	A	A	A	L	E	Q	M	P	R	F
Query Conservation
Alig confidence																									.																															.	.
Template Conservation																									.																															.	.
Template Sequence		G	K	D	R	T	E	P	V	K	G	F	H	K	A	M	V	K	T	M	S	A	A	L	.	K	I	P	H	F	G	Y	C	D	E	V	D	L	T	E	L	V	K	L	R	E	E	L	K	P	I	A	F	A	R	.	.	G	I	K	L	S	F	M	P	F	F	L	K	A	A	S	L	G	L	L	Q	F	P	I	L
Template Known Secondary structure											T	T											G	G	.	G	S																											T	T	.	.	T					S																G	G	G
Template Predicted Secondary structure																									.																															.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	S	L	S	E	D	G	Q	R	L	T	L	K	K	Y	I	N	I	G	V	A	V	D	T	P	N	G	L	V	V	P	V	F	K	D	V	N	K	K	G	I	I	E	L	S	R	E	L	M	T	I	S	K	K	A	R	D	G	K	L	T	A	G	E	M	Q	G	G	C	F	T	I	S	S	I	G	G	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	A	S	V	D	E	N	C	Q	N	I	T	Y	K	A	S	H	N	I	G	I	A	M	D	T	E	Q	G	L	I	V	P	N	V	K	N	V	Q	I	R	S	I	F	E	I	A	T	E	L	N	R	L	Q	K	L	G	S	A	G	Q	L	S	T	N	D	L	I	G	G	T	F	T	L	S	N	I	G	S	I	G
Template Known Secondary structure		S					T	T	S							S	S										T	T								T	T	G	G	G																		T	T	T								S									G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		558	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.		.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		T	T	H	F	A	P	I	V	N	A	P	E	V	A	I	L	G	V	S	K	S	A	M	E	P	V	W	N	.	G	K	E	F	V	P	R	L	M	L	P	I	S	L	S	F	D	H	R	V	I	D	G	A	D	G	A	R	F	I	T	I	I	N	N	T	L	S	D	I	R	R	L	V	M
Query Conservation																														.
Alig confidence																														.
Template Conservation
Template Sequence		G	T	Y	A	K	P	V	I	L	P	P	E	V	A	I	G	A	L	G	T	I	K	A	L	P	R	F	N	E	K	G	E	V	C	K	A	Q	I	M	N	V	S	W	S	A	D	H	R	I	I	D	G	A	T	V	S	R	F	S	N	L	W	K	S	Y	L	E	N	P	A	F	M	L	L
Template Known Secondary structure			S								T	T																		T	T	S																T	T	T																				T
Template Predicted Secondary structure
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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