Job Description P06959 Confidence 93.73% Date Thu Jan 5 10:59:28 GMT 2012 Rank 67 Aligned Residues 54 % Identity 24% Template c2aujD_ PDB info PDB header:transferase Chain: D: PDB Molecule:dna-directed rna polymerase beta' chain; PDBTitle: structure of thermus aquaticus rna polymerase beta'-subunit2 insert Resolution 2.70 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.									.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.										.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Query Sequence		E	I	L	V	K	V	G	D	K	V	E	A	E	Q	S	L	I	.	.	.	.	.	.	.	.	T	V	E	G	D	K	A	S	M	E	V	P	S	P	Q	A	G	I	V	K	.	.	.	.	.	.	.	.	.	E	I	K	V	S	V	G	D	K	T	Q	T	G	A	L	I	M
Query Conservation																			.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	V	I	V	P	E	G	A	K	V	Q	A	G	E	K	I	V	A	A	I	D	P	E	E	E	V	I	A	E	A	E	G	V	V	H	L	H	E	P	A	S	I	L	V	V	K	A	R	V	Y	P	F	E	D	D	V	E	V	T	T	G	D	R	V	A	P	G	D	V	L	A
Template Known Secondary structure					S		T	T					T	T							S	S	G	G	G					S	S	S															S							S	S		B	S			T	T			B		T	T
Template Predicted Secondary structure
Template SS confidence
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions