Job Description P06959 Confidence 46.24% Date Thu Jan 5 10:59:28 GMT 2012 Rank 107 Aligned Residues 112 % Identity 15% Template c1l5aA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:amide synthase; PDBTitle: crystal structure of vibh, an nrps condensation enzyme Resolution 2.55 Å

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		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	F	I	M	K	A	V	A	A	A	L	E	Q	M	P	R	F	N	S	S	L	S	E	D	G	Q	R	L	T	L	K	K	Y	I	N	I	G	V	A	V	D	T	P	N	G	L	V	V	P	V	F	K	D	V	N	K	K	G	I	I	E	L	S	R	E	L	M	T	I	S	K	K	A	R	D	G	K	L	T
Query Conservation
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	T	L	L	L	R	A	L	H	L	T	V	S	E	I	D	L	F	R	A	R	F	S	A	Q	G	E	L	Y	W	H	P	F	S	P	P	I	D	Y	Q	D	L	S	I	H	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	E	P	L	A	W	R	Q	I	E	Q	D	L	Q	R	S	S	T
Template Known Secondary structure															T		G	G	G	G					T	T							S	S										T	T		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T														T	S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80																.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	E	M	Q	G	G	C	F	T	I	S	S	I	G	G	L	G	T	T	H	F	A	P	I	V	N	A	P	E	V	A	I	L	G	V	S	K	S	A	M	E	P	V	W	N	G	K	E	F	V	P	R	L	M	L	P	I	S	L	S	F	D	H	R	V	I	D	G	A	D	G	A	R	F	I	T	I	I	N
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	I	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	I	T	S	H	Q	V	Y	R	L	S	H	S	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	L	I	Y	T	R	A	H	H	I	V	L	D	G	Y	G	M	M	L	F	E	Q	R	L	S
Template Known Secondary structure			B	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S										T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.																								.	.	.	.	.	.	110	.	.	.	.	.	.	.															.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		620	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	H	Y	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		143	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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