Return to main results Retrieve Phyre Job Id

Job DescriptionP23871
Confidence21.43%DateThu Jan 5 11:40:08 GMT 2012
Rank97Aligned Residues143
% Identity15%Templated1bqca_
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases beta-glycanases
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   102.......110.........120.........130.........140.........150.........160.........170.........180.
Predicted Secondary structure 




















Query SS confidence 















































































Query Sequence  YGSPSLESAVDELLAEHVDHIVVLPLYPQFSCSTVGAVWDELARILARKRSIPGISFIRDYADNHDYINALANSVRASFA
Query Conservation     
 
 


  
   
   





 
  
  
  
                 
  
      
  
      
   
 
Alig confidence 





















.




...............................




















Template Conservation           
  
   
 
 

.
    ...............................            
  
  
  
Template Sequence  NWYPQHTQAFADIKSHGANTVR. VVLSN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GVRWSKNGPSDVANVISLCKQ
Template Known Secondary structure  TT
TT
TTTT
S.

...............................SSSS



Template Predicted Secondary structure 








.


...............................








Template SS confidence 















































































   2930.........40.........50 ..... ....60.........70......
 
   182.......190.........200.........210.........220.........230.........240...... ...250......
Predicted Secondary structure 































.....
Query SS confidence 
































































. . . . .









Query Sequence  KHGEPDLLLLSYHGIPQRYADEGDDYPQRCRTTTRELASALGMAPEKVMMTFQSRFGREPWLMPY. . . . . TDETLKMLGE
Query Conservation         






 
      

 
          
   

       
 


  
   

 
 .....    
  
  
Alig confidence 
...




























































.....









Template Conservation   ...

 



 
                    
  

 
    
 

  

 


                     

 
Template Sequence  N. . . RLICMLEVHDTTGYGEQSGASTLDQAVDYWIELKSVLQGEEDYVLINIGNEPYGNDSATVAAWATDTSAAIQRLRA
Template Known Secondary structure  T...T
GGGTTTTTSTT


TTT
TTT
SSS


S
TT
Template Predicted Secondary structure 
...






























Template SS confidence 















































































   77 ..80.........90.........100.........110.........120.........130.........140.........150...
 
   257..260...... ...270.........
Predicted Secondary structure 



.





Query SS confidence 









.












Query Sequence  KGVGHIQVMC. PGFAADCLETLEE
Query Conservation   
 
 
 
 
.  



  


 
Alig confidence 









.












Template Conservation    
   
 
               
Template Sequence  AGFEHTLVVDAPNWGQDWTNTMRN
Template Known Secondary structure  TT

S

TTTTT
TT
Template Predicted Secondary structure 



















Template SS confidence 























   154.....160.........170.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions