Job Description P23871 Confidence 23.75% Date Thu Jan 5 11:40:08 GMT 2012 Rank 90 Aligned Residues 143 % Identity 14% Template c3rpeA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:modulator of drug activity b; PDBTitle: 1.1 angstrom crystal structure of putative modulator of drug activity2 (mdab) from yersinia pestis co92. Resolution 1.10 Å

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		73	.	.						.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure					.	.	.	.	.																	.	.																																			.
Query SS confidence					.	.	.	.	.																	.	.																																			.
Query Sequence		G	S	P	.	.	.	.	.	L	M	V	Y	S	R	Q	Q	Q	Q	A	L	A	Q	R	L	.	.	P	E	M	P	V	A	L	G	M	S	Y	G	S	P	S	L	E	S	A	V	D	E	L	L	A	E	H	V	D	H	I	V	V	L	.	P	L	Y	P	Q	F	S	C	S	T	V	G	A	V	W	D	E	L	A
Query Conservation					.	.	.	.	.																	.	.																																			.
Alig confidence					.	.	.	.	.																	.	.																										.	.								.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	M	K	E	F	A	H	S	K	G	A	L	N	L	T	L	T	N	V	A	A	D	F	L	R	E	S	G	H	Q	V	K	I	T	T	V	D	Q	G	Y	D	I	E	S	E	I	E	N	Y	L	W	.	.	A	D	T	I	I	Y	Q	M	P	A	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						B	T	T	B		S																	T	T								G	G	G														.	.		S									B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																					.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.																							.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	I	L	A	R	K	R	S	I	P	G	I	S	F	I	R	D	Y	A	D	N	H	D	Y	I	N	A	L	A	N	S	V	R	A	S	F	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	G	E	P	D	L	L	L	L	S	Y	H	G	I	P	Q	R	Y	A	D
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	M	G	E	P	W	I	L	K	K	Y	I	D	E	V	F	T	D	G	H	G	R	L	Y	Q	S	D	G	R	T	R	S	D	A	T	K	G	Y	G	S	G	G	L	I	Q	G	K	T	Y	M	L	S	V	T	W	N	A	P	R	E	A	F	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	B																T	B	T	T	T	B				S			S	T	T	T	T	S		T	T			B	S		T	T										S	S		T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		203	.	.	.	.						.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.
Query SS confidence							.	.	.	.	.
Query Sequence		E	G	D	D	Y	.	.	.	.	.	P	Q	R	C	R	T	T	T	R	E	L	A	S	A	L	G	M	A	P	E	K	V	M	M	T	F	Q	S	R	F	G	R	E	P	W	L	M	P	Y	T	D	E	T	L	K	M	L	G	E
Query Conservation							.	.	.	.	.
Alig confidence							.	.	.	.	.																															.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.
Template Sequence		D	P	E	Q	F	F	H	G	V	G	V	D	G	V	Y	L	P	F	H	K	A	N	Q	F	L	G	M	K	P	L	P	T	F	M	C	N	D	V	I	K	.	.	.	.	.	.	Q	P	D	I	E	G	D	I	A	R	Y	R	Q
Template Known Secondary structure			T	T	S	T	T	T	T							T										T	T											S	T	T	T	.	.	.	.	.	.	S
Template Predicted Secondary structure																																										.	.	.	.	.	.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.							.	.	.	.	.	.	180	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions