Job Description P23871 Confidence 32.74% Date Thu Jan 5 11:40:08 GMT 2012 Rank 67 Aligned Residues 118 % Identity 14% Template c3rfaA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ribosomal rna large subunit methyltransferase n; PDBTitle: x-ray structure of rlmn from escherichia coli in complex with s-2 adenosylmethionine Resolution 2.05 Å

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		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	L	L	L	S	Y	H	G	I	P	Q	R	Y	A	D	E	G	D	D	Y	P	Q	R	C	R	T	T	T	R	E	L	A	S	A	L	G	M	A	P	E	K	V	M	M	T	F	Q	S	R	F	G	R	E	P	W	L	M	P	Y	T	D	E	T	L	K	M	L	G	E	K	G	V	G	H	I	Q	V	M	C
Query Conservation
Alig confidence																	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template Sequence		T	N	V	V	M	M	G	M	G	E	P	L	L	N	L	.	.	.	.	.	.	.	N	N	V	V	P	A	M	E	I	M	L	D	D	F	G	F	G	L	S	K	R	R	V	T	L	S	T	S	.	.	.	.	.	.	.	.	.	G	V	V	P	A	L	D	K	L	G	D	M	I	D	V	A	L	A	I	S	L
Template Known Secondary structure		S						S	S	S		G	G	G			.	.	.	.	.	.	.												S	T	T	T	T				G	G	G						S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.								.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.										.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		267	.	.	270										.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.							.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure						.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Query Sequence		P	G	F	A	.	.	.	.	.	.	.	.	.	A	D	C	L	E	T	L	E	E	I	A	E	Q	N	R	E	V	F	L	G	A	G	G	.	.	.	.	.	.	K	K	Y	E	Y	I	P	A	L	N	A	T	P	E	H	I	E	M	M	A	N	L	V	A	A	Y	R
Query Conservation						.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Template Conservation
Template Sequence		H	A	P	N	D	E	I	R	D	E	I	V	P	I	N	K	K	Y	N	I	E	T	F	L	A	A	V	R	R	Y	L	E	K	S	N	A	N	Q	G	R	V	T	I	E	Y	V	M	L	D	H	V	N	D	G	T	E	H	A	H	Q	L	A	E	L	L	K	D	T	P
Template Known Secondary structure				S	S								S	G	G	G	G	T	S																	T	T	T	T	T									B	T	T	T	T		S											T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions