Job Description P23871 Confidence 70.71% Date Thu Jan 5 11:40:08 GMT 2012 Rank 15 Aligned Residues 178 % Identity 13% Template c3ewbX_ PDB info PDB header:transferase Chain: X: PDB Molecule:2-isopropylmalate synthase; PDBTitle: crystal structure of n-terminal domain of putative 2-2 isopropylmalate synthase from listeria monocytogenes Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		73	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.								.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure					.																																																.										.	.	.	.	.	.	.
Query SS confidence					.																																																.										.	.	.	.	.	.	.
Query Sequence		G	S	P	.	L	M	V	Y	S	R	Q	Q	Q	Q	A	L	A	Q	R	L	P	E	M	P	V	A	L	G	M	S	Y	G	S	P	S	L	E	S	A	V	D	E	L	L	A	E	H	V	D	H	I	.	V	V	L	P	L	Y	P	Q	F	.	.	.	.	.	.	.	S	C	S	T	V	G	A	V	W	D	E	L
Query Conservation					.																																																.										.	.	.	.	.	.	.
Alig confidence					.																																																.										.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	F	P	I	S	S	P	G	D	F	E	C	V	K	A	I	A	K	A	I	K	H	C	S	V	T	G	L	A	R	C	V	E	G	D	I	D	R	A	E	E	A	L	K	D	A	V	S	P	Q	I	H	I	F	L	A	T	S	D	V	H	X	E	Y	K	L	K	X	S	R	A	E	V	L	A	S	I	K	H	H
Template Known Secondary structure				G	G	G																	S	S								S	S												T	T		S	S										S							T	T
Template Predicted Secondary structure
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	I	L	A	R	K	R	S	I	P	G	I	S	F	I	R	D	Y	A	D	N	H	D	Y	I	N	A	L	A	N	S	V	R	A	S	F	A	K	H	G	E	P	D	L	L	L	L	S	Y	H	G	I	P	Q	R	Y	A	D	E	G	D	D	Y	P	Q	R	C	R	T	T	T	R	E	L	A	S	A	L	G
Query Conservation
Alig confidence																																						.	.	.	.	.									.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.									.	.	.	.	.	.	.	.
Template Sequence		I	S	Y	A	R	Q	K	F	D	V	V	Q	F	S	P	E	D	A	T	R	S	D	R	A	F	L	I	E	A	V	Q	T	A	I	D	A	.	.	.	.	.	G	A	T	V	I	N	I	P	.	.	.	.	.	.	.	.	D	T	V	G	Y	T	N	P	T	E	F	G	Q	L	F	Q	D	L	R	R	E	I	K
Template Known Secondary structure							T	T		S								T	G	G	G	S															T	.	.	.	.	.	T								.	.	.	.	.	.	.	.		S	S	S																			T
Template Predicted Secondary structure																																						.	.	.	.	.									.	.	.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160						.	.	.	.	.	.	.	.									.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	P	E	K	V	M	M	T	F	Q	S	R	F	G	R	E	P	W	L	M	P	Y	T	D	E	T	L	K	M	L	G	E	K	G	V	G	H	I	Q	V	M	C	P	G	F
Query Conservation
Alig confidence		.																	.	.	.	.											.
Template Conservation		.																	.	.	.	.											.
Template Sequence		.	Q	F	D	D	I	I	F	A	S	H	C	H	D	D	L	G	.	.	.	.	X	A	T	A	N	A	L	A	A	I	.	E	N	G	A	R	R	V	E	G	T	I	N	G	I
Template Known Secondary structure		.	T	G	G	G	S							B		T	T	S	.	.	.	.											.		T	T							B	G	G	G
Template Predicted Secondary structure		.																	.	.	.	.											.
Template SS confidence
			192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.					.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions