Job Description P23871 Confidence 61.83% Date Thu Jan 5 11:40:08 GMT 2012 Rank 27 Aligned Residues 136 % Identity 13% Template c2ov3A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:periplasmic binding protein component of an abc PDBTitle: crystal structure of 138-173 znua deletion mutant plus zinc2 bound Resolution 2.40 Å

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		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		R	D	Y	A	D	N	H	D	Y	I	N	A	L	A	N	S	V	R	A	S	F	A	K	H	G	E	P	D	L	L	L	L	S	Y	H	G	I	P	Q	R	Y	A	D	E	G	D	D	Y	P	Q	R	C	R	T	T	T	R	E	L	A	S	A	L	G	M	A	P	E	K	V	M	M	T	F	Q	S	R	F	G	.
Query Conservation																																																																																	.
Alig confidence																														.	.	.	.	.	.	.	.	.																																											.
Template Conservation																														.	.	.	.	.	.	.	.	.
Template Sequence		P	H	I	W	L	S	P	T	L	V	K	R	Q	A	T	T	I	A	K	E	L	A	E	L	D	P	D	N	.	.	.	.	.	.	.	.	.	R	D	Q	Y	E	A	N	L	A	A	F	L	A	E	L	E	R	L	N	Q	E	L	G	Q	I	L	Q	P	L	P	Q	R	K	F	I	V	F	H	P	S	W	A	Y
Template Known Secondary structure				G	G	G																					G	G	G	.	.	.	.	.	.	.	.	.																											T	T		S							S	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.										.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		239	240	.	.	.	.									.	.								.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.			.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.			.	.	.	.	.	.	.
Query Sequence		R	E	P	W	L	M	.	.	.	.	.	.	.	.	P	Y	.	.	.	.	.	.	.	T	D	E	T	L	K	M	L	G	E	K	G	V	G	H	I	Q	V	M	C	P	G	F	A	A	D	C	L	E	T	L	E	E	I	A	E	Q	N	R	E	V	F	L	G	A	G	G	K	K	Y	E	Y	I	P	A	L	N
Query Conservation								.	.	.	.	.	.	.	.			.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.			.	.	.	.	.	.	.															.																	.	.	.	.	.	.	.	.	.	.						.
Template Conservation																																							.																	.	.	.	.	.	.	.	.	.	.						.
Template Sequence		F	A	R	D	Y	N	L	V	Q	I	P	I	E	V	E	G	Q	E	P	S	A	Q	E	L	K	Q	L	I	D	T	A	K	E	N	N	L	T	.	M	V	F	G	E	T	Q	F	S	T	K	S	S	E	A	I	.	.	.	.	.	.	.	.	.	.	A	A	E	I	G	.	A	G	V	E	L	L	D	P	L	A
Template Known Secondary structure						T	T						S			S	S	S				T	T													T			.						T	T	S									.	.	.	.	.	.	.	.	.	.					T	.								T	T
Template Predicted Secondary structure																																							.																	.	.	.	.	.	.	.	.	.	.						.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.		.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.											.	.	.	.	.		.	.	.	310	.	.	.	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	P	E	H	I	E	M	M	A	N	L	V	A	A
Query Conservation
Alig confidence				.	.
Template Conservation				.	.
Template Sequence		A	D	.	.	W	S	S	N	L	K	A	V	A	Q	K
Template Known Secondary structure		S	S	.	.
Template Predicted Secondary structure				.	.
Template SS confidence
		317	.			.	320	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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