Job Description P23871 Confidence 53.20% Date Thu Jan 5 11:40:08 GMT 2012 Rank 38 Aligned Residues 164 % Identity 16% Template c2ekcA_ PDB info PDB header:lyase Chain: A: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: structural study of project id aq_1548 from aquifex aeolicus vf5 Resolution 2.00 Å

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		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		L	E	S	A	V	D	E	L	L	A	E	H	V	D	H	I	V	V	L	P	L	Y	P	Q	F	S	C	S	T	V	G	A	V	W	D	E	L	A	R	I	L	A	R	K	R	S	I	P	G	I	S	.	.	F	I	R	D	Y	A	D	N	H	D	Y	I	N	A	L	A	N	S	V	R	A	S	F	A	K	H	G
Query Conservation																																																					.	.
Alig confidence																				.	.	.																															.	.																										.	.
Template Conservation																				.	.	.																																																										.	.
Template Sequence		I	S	D	K	F	T	E	L	K	E	K	R	E	K	A	L	V	S	.	.	.	Y	L	M	V	G	Y	P	D	Y	E	T	S	L	K	A	F	K	E	V	L	K	N	G	T	D	I	L	E	I	G	F	P	F	S	D	P	V	A	D	G	P	T	I	Q	V	A	H	E	V	A	L	K	N	G	I	R	F	.	.
Template Known Secondary structure													T	B						.	.	.				T	T	S	S															T	T		S									S			T	T	S														T	T				.	.
Template Predicted Secondary structure																				.	.	.																																																										.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.				.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	D	L	L	L	L	S	Y	H	G	I	P	Q	R	Y	A	D	E	G	D	D	Y	P	Q	R	C	R	T	T	T	R	E	L	A	S	A	L	G	M	A	P	E	K	V	M	M	T	F	Q	S	R	F	G	R	E	P	W	L	M	P	Y	T	D	E	T	L	K	M	L	G	E	K	G	V	G	H	I	Q	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.										.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.										.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	V	L	E	L	S	E	T	L	R	K	E	F	P	D	I	P	F	.	L	L	M	T	Y	Y	N	P	I	.	.	.	.	.	F	R	I	G	L	E	K	F	C	R	L	S	R	E	K	G	I	D	G	F	I	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	T	S			.										.	.	.	.	.															T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.										.	.	.	.	.
Template SS confidence
																										79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.						.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	C	P	G	F	A	A	D	C	L	E	T	L	E	E	I	A	E	Q	N	R	E	V	F	L	G	A	G	G	K	K	Y	E	Y	I	P	A	L	N	A	T	P	E	H	I	E	M	M	A	N	L
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.																	.
Template Conservation					.	.	.	.	.	.	.	.	.																	.
Template Sequence		P	D	L	.	.	.	.	.	.	.	.	.	P	P	E	E	A	E	E	L	K	A	V	M	K	K	Y	V	.	L	S	F	V	P	L	G	A	P	T	S	T	R	K	R	I	K	L	I	C	E	A
Template Known Secondary structure		T	T		.	.	.	.	.	.	.	.	.															T	T	.									T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		129	130	.										.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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