Return to main results Retrieve Phyre Job Id

Job DescriptionP23882
Confidence95.93%DateThu Jan 5 11:40:18 GMT 2012
Rank36Aligned Residues74
% Identity16%Templatec3q2kB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:oxidoreductase; PDBTitle: crystal structure of the wlba dehydrogenase from bordetella pertussis2 in complex with nadh and udp-glcnaca
Resolution2.13 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20...... ...30.........40.........50.........60.........70.........80
Predicted Secondary structure 






..



























Query SS confidence 























. .





















































Query Sequence  ESLRIIFAGTPDFAARHLDALLSS. . GHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVAE
Query Conservation    


 
 

   
   
  
   ..   
  


       
        
   
    

               
  
Alig confidence 























..















...........











.......







Template Conservation 
 


 


 
  
               



 
       ...........            .......    

  
Template Sequence  RKIRFGLVGCGRISKNHIGAIAQHGDRAELVEICDTNPEALQ. . . . . . . . . . . AAEAATGARPFS. . . . . . . SLSDMLAQ
Template Known Secondary structure 



STTTT
TTT
SS...........

B

S.......S
Template Predicted Secondary structure 











...........




.......


Template SS confidence 















































































   910.........20.........30.........40.........50 .........60.. .......70
 
   81........90....
Predicted Secondary structure 








Query SS confidence 













Query Sequence  LQADVMVVVAYGLI
Query Conservation     



      
Alig confidence 













Template Conservation     
 
 
 

   
Template Sequence  GNADALVLATPSGL
Template Known Secondary structure 


S
S
GGG
Template Predicted Secondary structure 






Template SS confidence 













   71........80....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions