Job Description P23882 Confidence 100.00% Date Thu Jan 5 11:40:18 GMT 2012 Rank 3 Aligned Residues 302 % Identity 62% Template c3q0iA_ PDB info PDB header:transferase Chain: A: PDB Molecule:methionyl-trna formyltransferase; PDBTitle: methionyl-trna formyltransferase from vibrio cholerae Resolution 1.89 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	R	I	I	F	A	G	T	P	D	F	A	A	R	H	L	D	A	L	L	S	S	G	H	N	V	V	G	V	F	T	Q	P	D	R	P	A	G	R	G	K	K	L	M	P	S	P	V	K	V	L	A	E	E	K	G	L	P	V	F	Q	P	V	S	L	R	P	Q	E	N	Q	Q	L	V	A	E	L	Q	A
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.
Template Sequence		S	L	R	I	V	F	A	G	T	P	D	F	A	A	R	H	L	A	A	L	L	S	S	E	H	E	I	I	A	V	Y	T	Q	P	E	T	A	.	.	.	.	.	.	.	.	.	S	P	V	K	T	L	A	L	E	H	N	V	P	V	Y	Q	P	E	N	F	K	S	D	E	S	K	Q	Q	L	A	A	L	N	A
Template Known Secondary structure											S												T	S	S	S													.	.	.	.	.	.	.	.	.										T	T							S		S		S									T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40										.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	M	V	V	V	A	Y	G	L	I	L	P	K	A	V	L	E	M	P	R	L	G	C	I	N	V	H	G	S	L	L	P	R	W	R	G	A	A	P	I	Q	R	S	L	W	A	G	D	A	E	T	G	V	T	I	M	Q	M	D	V	G	L	D	T	G	D	M	L	Y	K	L	S	C	P	I	T	A	E	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	X	V	V	V	A	Y	G	L	L	L	P	K	V	V	L	D	T	P	K	L	G	C	I	N	V	H	G	S	I	L	P	R	W	R	G	A	A	P	I	Q	R	S	I	W	A	G	D	S	E	T	G	V	T	I	X	Q	X	D	V	G	L	D	T	G	D	X	L	K	I	A	T	L	P	I	E	A	S	D
Template Known Secondary structure		S					S	S			S								T	S	S	T	T							S	S	S	T	T	T	T	B	S	S										T		S											S	S	S	S		S												T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	G	T	L	Y	D	K	L	A	E	L	G	P	Q	G	L	I	T	T	L	K	Q	L	A	D	G	T	A	K	P	E	V	Q	D	E	T	L	V	T	Y	A	E	K	L	S	K	E	E	A	R	I	D	W	S	L	S	A	A	Q	L	E	R	C	I	R	A	F	N	P	W	P	M	S	W	L	E	I	E	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	S	A	S	X	Y	D	K	L	A	E	L	G	P	Q	A	L	L	E	C	L	Q	D	I	A	Q	G	T	A	V	A	V	K	Q	D	D	G	L	A	N	Y	A	H	K	L	S	K	E	E	A	R	I	N	W	S	D	A	A	T	H	I	E	R	C	I	R	A	F	N	P	W	P	X	S	H	F	E	V	A	E
Template Known Secondary structure																												T					B				G	G	G			B										B			T	T	S	B											T	T	T	T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	V	K	V	W	K	A	S	V	I	D	T	A	T	N	A	A	P	G	T	I	L	E	A	N	K	Q	G	I	Q	V	A	T	G	D	G	I	L	N	L	L	S	L	Q	P	A	G	K	K	A	M	S	A	Q	D	L	L	N	S	R	R	E	W	F	V	P	G	N	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	S	I	K	V	W	Q	A	R	V	E	T	R	A	V	T	Q	T	P	G	T	I	I	Q	A	D	K	S	G	I	Y	V	A	T	G	Q	D	V	L	V	L	E	S	L	Q	I	P	G	K	K	A	L	P	V	Q	D	I	L	N	A	R	A	D	W	F	S	V	G	S	Q	L
Template Known Secondary structure																		S		T	T	B						T	T							S	B	S										T	T	S													T	T	T	T		T	T		B
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions