Job Description P23882 Confidence 90.34% Date Thu Jan 5 11:40:18 GMT 2012 Rank 140 Aligned Residues 98 % Identity 9% Template c3ketA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:redox-sensing transcriptional repressor rex; PDBTitle: crystal structure of a rex-family transcriptional regulatory protein2 from streptococcus agalactiae bound to a palindromic operator Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		S	E	S	L	R	I	I	F	A	G	T	P	D	F	A	A	R	H	L	D	.	.	A	L	L	S	S	G	H	N	V	V	G	V	F	T	Q	P	D	R	P	A	G	R	G	K	K	L	M	P	S	P	V	K	V	L	A	E	E	K	G	L	P	V	F	Q	P	V	S	L	R	P	Q	E	N	Q	Q	L	V	A
Query Conservation																						.	.
Alig confidence																						.	.																												.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Template Sequence		H	S	T	T	N	V	M	L	V	G	C	G	N	I	G	R	A	L	L	H	Y	R	F	H	D	R	N	K	M	Q	I	S	M	A	F	D	L	D	S	N	D	L	V	G	K	T	T	E	D	.	.	.	.	.	.	.	.	.	.	.	G	I	P	V	Y	G	I	S	.	.	.	.	.	T	I	N	D	H	L	I
Template Known Secondary structure		S	S										S								T	S		G	G	G	T	S	S										T	T	S	T	T	T	T	S	B		T	T	.	.	.	.	.	.	.	.	.	.	.	S		B				G	G	.	.	.	.	.	G					T	S
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130												.	.	.	.	.	.	.	.						.	140	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		E	L	Q	A	D	V	M	V	V	V	A	.	.	.	Y	G	L	I	L	P	K	A	V	L	E	M	P	R	L	G	C	I	N	V	H	G	S	L	L
Query Conservation													.	.	.
Alig confidence													.	.	.
Template Conservation
Template Sequence		D	S	D	I	E	T	A	I	L	T	V	P	S	T	E	A	Q	E	V	A	D	I	L	V	K	A	G	I	K	G	I	L	S	F	S	P	V	H	L
Template Known Secondary structure		S	S									S		G	G	G											T	T								S	S	S
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions