Job Description P23882 Confidence 88.27% Date Thu Jan 5 11:40:18 GMT 2012 Rank 170 Aligned Residues 73 % Identity 19% Template c3fwzA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:inner membrane protein ybal; PDBTitle: crystal structure of trka-n domain of inner membrane protein ybal from2 escherichia coli Resolution 1.79 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	E	S	L	R	I	I	F	A	G	T	P	D	F	A	A	R	H	L	D	A	L	L	S	S	G	H	N	V	V	G	V	F	T	Q	P	D	R	P	A	G	R	G	K	K	L	M	P	S	P	V	K	V	L	A	E	E	K	G	L	P	V	F	Q	P	V	S	L	R	P	Q	E	N	Q	Q	L	V	A	E
Query Conservation
Alig confidence					.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation					.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		I	C	N	.	.	H	A	L	L	V	G	Y	G	R	V	G	S	L	L	G	E	K	L	L	A	S	D	I	P	L	V	V	I	E	T	S	R	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	E	L	R	E	R	G	V	R	A	V	L	.	G	N	A	A	N	E	E	I	X	Q	L	A	H	L
Template Known Secondary structure				S	.	.								S													T	T								S					.	.	.	.	.	.	.	.	.	.	.	.	.							T	T						.	S		T	T	S							T	T	G
Template Predicted Secondary structure					.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		416	.	.			.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.														.	.	.	.	.	.	.	460	.	.	.	.	.		.	.	.	.	470	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	A	D	V	M	V	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	C	A	K	W	L	I	L	T
Template Known Secondary structure		G	G		S
Template Predicted Secondary structure
Template SS confidence
		480	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions