 |
Job Description | P23882 | Confidence | 80.32% | Date | Thu Jan 5 11:40:18 GMT 2012 |
Rank | 241 | Aligned Residues | 84 |
% Identity | 14% | Template | c2xdqB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:light-independent protochlorophyllide reductase subunit b; |
PDBTitle: dark operative protochlorophyllide oxidoreductase (chln-2 chlb)2 complex
|
Resolution | 2.40 Å |
|
 |
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | |
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | I | I | F | A | G | T | P | D | F | A | A | R | H | L | D | A | L | L | . |
S | S | G | H | N | V | V | G | V | F | T | Q | P | D | R | P | A | G | R | G | K | K | L | M | P | S | P | V | K | V | L | A | E | E | K | G | L | P | V | F | Q | P | V | S | L | R | P | Q | E | N | Q | Q | L | V | A | E | L | Q | A | D |
Query Conservation |   |
|
|   |
|   |
|
|   |   |   |
|   |   |   |
|   |   |
|   | . |   |   |   |   |   |
|   |   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   | . | . |
|   |   |
|
|   |   |   |
|   |   |   |   |
|
|
Template Sequence |   |
K | A | V | V | F | G | D | N | T | H | A | A | A | M | T | K | I | L | S | R | E | M | G | I | H | V | V | W | A | G | T | Y | C | K | Y | D | A | D | W | . |
. |
. |
. |
. |
. |
. |
. |
F | R | A | E | V | A | G | F | C | D | E | V | L | I | T | D | . |
. |
D | H | T | V | V | G | D | A | I | A | R | V | E | P | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  | S |
| G | G | G |  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  | T | T | T | S | S |  |  |  |  |
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |
|
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
302 | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | |
|
. | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . |
  |
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | M | V | V | V | A | Y | G | L | I | L | P | K | A | V |
Query Conservation |   |
|
|
|   |   |   |   |   |   |
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |
|   |   |   |   |   |
|   |   |   |
Template Sequence |   |
A | I | F | G | T | Q | M | E | R | H | V | G | K | R | L |
Template Known Secondary structure |   |
 |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
372 | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|