Job Description P23882 Confidence 55.84% Date Thu Jan 5 11:40:18 GMT 2012 Rank 444 Aligned Residues 95 % Identity 12% Template c2nvuB_ PDB info PDB header:protein turnover, ligase Chain: B: PDB Molecule:maltose binding protein/nedd8-activating enzyme PDBTitle: structure of appbp1-uba3~nedd8-nedd8-mgatp-ubc12(c111a), a2 trapped ubiquitin-like protein activation complex Resolution 2.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	L	R	I	I	F	A	G	T	P	D	F	A	A	R	H	L	D	A	L	L	S	S	G	H	N	V	V	G	V	F	T	Q	P	D	R	P	A	G	R	G	K	K	L	M	P	S	P	V	K	V	L	A	E	E	K	G	L	P	V	F	Q	P	V	S	L	R	P	Q	E	N	Q	Q	L	V	A	E	L	Q
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	T	C	K	V	L	V	I	G	A	G	G	L	G	C	E	L	L	K	N	L	A	L	S	G	F	R	Q	I	H	V	I	.	.	.	.	.	.	.	.	.	.	.	D	M	D	T	I	D	V	S	N	L	N	R	Q	F	L	F	R	P	K	D	I	G	R	P	K	A	E	V	A	A	E	F	L	N	D	R	V
Template Known Secondary structure			T									S	S											T	T	T								.	.	.	.	.	.	.	.	.	.	.				B			G	G	G	G	G	T		T	T			G	G	G	T	T	S	B													S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2047	.	.	2050	.	.	.	.	.	.	.	.	.	2060	.	.	.	.	.	.	.	.	.	2070	.	.	.	.	.	.	.	.												.	2080	.	.	.	.	.	.	.	.	.	2090	.	.	.	.	.	.	.	.	.	2100	.	.	.	.	.	.	.	.	.	2110	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		A	D	V	M	V	V	V	A	Y	G	L	I	.	.	L	P	K	A	V	L	E	M	P	R	L	G	C	I	N
Query Conservation														.	.
Alig confidence														.	.												.
Template Conservation																											.
Template Sequence		P	N	C	N	V	V	P	H	F	N	K	I	Q	D	F	N	D	T	F	Y	R	Q	F	H	I	.	I	V	C
Template Known Secondary structure		T	T								S		G	G	G	S							T		S		.
Template Predicted Secondary structure																											.
Template SS confidence
		2116	.	.	.	2120	.	.	.	.	.	.	.	.	.	2130	.	.	.	.	.	.	.	.	.	2140		.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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