Job Description P23882 Confidence 56.28% Date Thu Jan 5 11:40:18 GMT 2012 Rank 440 Aligned Residues 166 % Identity 20% Template c2j6iC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:formate dehydrogenase; PDBTitle: candida boidinii formate dehydrogenase (fdh) c-terminal2 mutant Resolution 1.55 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	I	I	F	A	G	T	P	D	F	A	A	R	H	L	D	A	L	L	S	S	G	H	N	V	V	G	V	F	T	Q	P	D	R	P	A	G	R	G	K	K	L	M	P	S	P	V	K	V	L	A	E	E	K	G	L	P	V	F	Q	P	V	S	L	R	P	Q	E	N	Q	Q	L	V	A	E	L	Q	A	D
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.								.	.								.	.						.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.								.	.								.	.						.	.	.	.	.
Template Sequence		K	T	I	A	T	I	G	A	G	R	I	G	Y	R	V	L	E	R	L	V	P	F	N	P	K	E	L	L	Y	Y	D	Y	Q	A	L	P	K	.	.	.	.	.	.	.	.	.	.	.	.	D	A	E	E	K	V	G	.	.	A	R	R	V	E	N	I	.	.	E	E	L	V	A	.	.	.	.	.	Q	A	D
Template Known Secondary structure										S											G	G	G			S							S	S					.	.	.	.	.	.	.	.	.	.	.	.							T	.	.					S	S		.	.						.	.	.	.	.			S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.								.	.								.	.						.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.													.	.	.	.	.	.	.			.	210	.	.	.	.	.			.	.	.	.	220						.	.	.
		85	.	.	.						.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120					.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure						.	.	.	.	.																																	.	.	.	.															.
Query SS confidence						.	.	.	.	.																																	.	.	.	.															.
Query Sequence		V	M	V	V	.	.	.	.	.	V	A	Y	G	L	I	L	P	K	A	V	L	E	M	P	R	L	G	C	I	N	V	H	G	S	L	L	P	R	W	R	G	.	.	.	.	A	A	P	I	Q	R	S	L	W	A	G	D	A	E	.	T	G	V	T	I	M	Q	M	D	V	G	L	D	T	G	D	M	L	Y	K
Query Conservation						.	.	.	.	.																																	.	.	.	.															.
Alig confidence						.	.	.	.	.																										.	.	.	.	.			.	.	.	.															.
Template Conservation																																				.	.	.	.	.
Template Sequence		I	V	T	V	N	A	P	L	H	A	G	T	K	G	L	I	N	K	E	L	L	S	K	F	K	K	G	A	W	L	V	N	T	A	.	.	.	.	.	R	G	A	I	C	V	A	E	D	V	A	A	A	L	E	S	G	Q	L	R	G	Y	G	G	D	V	W	F	P	Q	P	A	P	K	D	H	P	W	R	D	M
Template Known Secondary structure										S	T	T	T	T	T		B						T	T	S		T	T							S	.	.	.	.	.		G	G	G	B												T	S							S			S	S	S	S			T	T
Template Predicted Secondary structure																																				.	.	.	.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.						.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		155	.	.	.						.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.
Query SS confidence						.	.	.	.	.
Query Sequence		L	S	C	P	.	.	.	.	.	I	T	A	E	D	T	S	G	T	L	Y	D	K	L	A	E	L	G	P	Q	G	L	I	T	T	L	K	Q	L	A	D	G	T	A	K	P	E	V	Q	D
Query Conservation						.	.	.	.	.
Alig confidence						.	.	.	.	.						.	.
Template Conservation																.	.
Template Sequence		R	N	K	Y	G	A	G	N	A	M	T	P	H	Y	.	.	S	G	T	T	L	D	A	Q	T	R	Y	A	Q	G	T	V	N	I	L	E	S	F	F	T	G	K	F	D	Y	R	P	Q	D
Template Known Secondary structure				T	T	S								S		.	.	G	G	G	S																				T	S						G	G	G
Template Predicted Secondary structure																.	.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.			.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions