Job Description P23882 Confidence 57.10% Date Thu Jan 5 11:40:18 GMT 2012 Rank 433 Aligned Residues 81 % Identity 22% Template c2j289_ PDB info PDB header:ribosome Chain: 9: PDB Molecule:signal recognition particle 54; PDBTitle: model of e. coli srp bound to 70s rncs Resolution 8.0 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.							.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure												.	.	.	.	.	.																																																														.	.	.
Query SS confidence												.	.	.	.	.	.																																																														.	.	.
Query Sequence		S	E	S	L	R	I	I	F	A	G	.	.	.	.	.	.	T	P	D	F	A	A	R	H	L	D	A	L	L	S	S	G	H	N	V	V	G	V	F	T	Q	P	D	R	P	A	G	R	G	K	K	L	M	P	S	P	V	K	V	L	A	E	E	K	G	L	P	V	F	Q	P	V	S	L	R	P	Q	.	.	.
Query Conservation												.	.	.	.	.	.																																																														.	.	.
Alig confidence												.	.	.	.	.	.																																			.	.	.	.	.	.																						.	.	.
Template Conservation																																																				.	.	.	.	.	.
Template Sequence		Q	P	P	A	V	V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	.	.	.	.	.	.	L	E	T	L	A	E	Q	V	G	V	D	F	F	P	S	D	V	G	Q	K	P	V	D	I
Template Known Secondary structure		S	S	S								S	S	S	S	S	S	T	T	T										T	S	S	S					B						S	S	S		S				.	.	.	.	.	.								T	T							S	S				T	T
Template Predicted Secondary structure																																																				.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.							.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
				73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	E	N	Q	Q	L	V	A	E	L	Q	A	D	V	M	V	V
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		V	N	A	A	L	K	E	A	K	L	K	F	Y	D	V	L	L	V
Template Known Secondary structure												T	T		S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions