Job Description P23882 Confidence 89.72% Date Thu Jan 5 11:40:18 GMT 2012 Rank 149 Aligned Residues 94 % Identity 23% Template c2iv3B_ PDB info PDB header:transferase Chain: B: PDB Molecule:glycosyltransferase; PDBTitle: crystal structure of avigt4, a glycosyltransferase involved2 in avilamycin a biosynthesis Resolution 2.3 Å

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		4	.	.	.	.	.	10																						.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	L	R	I	I	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	P	D	F	A	A	R	H	L	D	A	L	L	S	S	G	H	N	V	V	G	V	F	T	Q	P	D	R	P	A	G	R	G	K	K	L	M	P	S	P	V	K	V	L	A	E	E	K	G	L	P
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	L	K	V	A	L	V	N	I	P	L	R	V	P	G	S	D	A	W	I	S	V	P	P	Q	G	Y	G	G	I	Q	W	V	V	A	N	L	M	D	G	L	L	E	L	G	H	E	.	V	F	L	L	G	A	P	S	P	G	R	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G
Template Known Secondary structure													B		T	T	S	S	S	B			S	S		S	S	S																	T	T			.					S							T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.																				.
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	Q	P	V	S	L	R	P	Q	E	N	Q	Q	L	V	A	E	L	Q	A	D	V	M	V	V	V	A	Y	G	L	I	L	P	K	A	V	L	E	M	P	R	L	G	C	I	N	V	H	G	S	L	L	P	R	W	R
Query Conservation
Alig confidence																																												.	.
Template Conservation																																												.	.
Template Sequence		L	T	V	V	P	A	G	E	P	E	E	I	E	R	W	L	R	T	A	D	V	D	V	V	H	D	H	S	G	G	V	I	G	P	A	G	L	P	P	G	T	A	.	.	F	I	S	S	H	H	F	T	T	R	P	V	N
Template Known Secondary structure						S			S														S						S	S	S	S	S		S	T	T			T	T			.	.							S	S	S			S
Template Predicted Secondary structure																																												.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions