Job Description P23882 Confidence 89.93% Date Thu Jan 5 11:40:18 GMT 2012 Rank 145 Aligned Residues 76 % Identity 20% Template c2g1uA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:hypothetical protein tm1088a; PDBTitle: crystal structure of a putative transport protein (tm1088a) from2 thermotoga maritima at 1.50 a resolution Resolution 1.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	S	L	R	I	I	F	A	G	T	P	D	F	A	A	R	H	L	D	A	L	L	S	S	G	H	N	V	V	G	V	F	T	Q	P	D	R	P	A	G	R	G	K	K	L	M	P	S	P	V	K	V	L	A	E	E	K	G	L	P	V	F	Q	P	V	S	L	R	P	Q	E	N	Q	Q	L	V	A	E	L
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		Q	K	S	K	Y	I	V	I	F	G	C	G	R	L	G	S	L	I	A	N	L	A	S	S	S	G	H	S	V	V	V	V	D	K	N	E	Y	A	F	H	.	.	.	.	.	.	.	.	.	.	.	.	R	L	N	S	E	F	S	G	F	T	V	V	G	.	D	A	A	E	F	E	T	L	K	E	C	G	M	E
Template Known Secondary structure													S													T	T								S		G	G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	G	S		T	T			S					S	.		T	T	S						T	T	T	G	G
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.													.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.
		82	.	.	.	.	.	.	.	90
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	D	V	M	V	V	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	D	M	V	F	A	F	T
Template Known Secondary structure		G		S						S
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions