Job Description P23882 Confidence 88.51% Date Thu Jan 5 11:40:18 GMT 2012 Rank 165 Aligned Residues 96 % Identity 14% Template c2dt5A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:at-rich dna-binding protein; PDBTitle: crystal structure of ttha1657 (at-rich dna-binding protein) from2 thermus thermophilus hb8 Resolution 2.16 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		M	S	E	S	L	R	I	I	F	A	G	T	P	D	F	A	A	R	H	L	D	A	L	L	S	S	.	G	H	N	V	V	G	V	F	T	Q	P	D	R	P	A	G	R	G	K	K	L	M	P	S	P	V	K	V	L	A	E	E	K	G	L	P	V	F	Q	P	V	S	L	R	P	Q	E	N	Q	Q	L	V	A
Query Conservation																												.
Alig confidence																												.																					.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Template Sequence		L	N	R	K	W	G	L	C	I	V	G	M	G	R	L	G	S	A	L	A	D	Y	P	G	F	G	E	S	F	E	L	R	G	F	F	D	V	D	P	E	K	V	G	R	P	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	V	I	E	H	V	D	.	.	.	.	.	L	L	P	Q	R	V	P
Template Known Secondary structure		T	T	S										S										S				S	S									S		T	T	T	T	T				T	.	.	.	.	.	.	.	.	.	.	.	.	.	T						G	G	.	.	.	.	.	G					S	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.														.	.	.	.	.	.	130	.						.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		E	L	Q	A	D	V	M	V	V	V	.	.	.	A	Y	G	L	I	L	P	K	A	V	L	E	M	P	R	L	G	C	I	N	V	H	G	S	L	L
Query Conservation												.	.	.
Alig confidence			.									.	.	.
Template Conservation			.
Template Sequence		G	.	R	I	E	I	A	L	L	T	V	P	R	E	A	A	Q	K	A	A	D	L	L	V	A	A	G	I	K	G	I	L	N	F	A	P	V	V	L
Template Known Secondary structure		T	.	T								S																T								S	S	S
Template Predicted Secondary structure			.
Template SS confidence
		139		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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