Job Description P23882 Confidence 100.00% Date Thu Jan 5 11:40:18 GMT 2012 Rank 5 Aligned Residues 295 % Identity 29% Template c1z7eC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:protein arna; PDBTitle: crystal structure of full length arna Resolution 3.00 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	I	I	F	A	G	T	P	D	F	A	A	R	H	L	D	A	L	L	S	S	G	H	N	V	V	G	V	F	T	Q	P	D	R	P	A	G	R	G	K	K	L	M	P	S	P	V	K	V	L	A	E	E	K	G	L	P	V	F	Q	P	V	S	L	R	P	Q	E	N	Q	Q	L	V	A	E	L	Q	A	D
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	T	V	V	F	A	Y	H	D	M	G	C	L	G	I	E	A	L	L	A	A	G	Y	E	I	S	A	I	F	T	H	T	D	.	.	.	.	.	.	.	.	.	.	.	G	S	V	A	R	L	A	A	E	R	G	I	P	V	Y	A	P	D	N	V	N	H	P	L	W	V	E	R	I	A	Q	L	S	P	D
Template Known Secondary structure																							T	T												.	.	.	.	.	.	.	.	.	.	.										T	T							S		T	T	S													S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.												.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	V	V	V	A	Y	G	L	I	L	P	K	A	V	L	E	M	P	R	L	G	C	I	N	V	H	G	S	L	L	P	R	W	R	G	A	A	P	I	Q	R	S	L	W	A	G	D	A	E	T	G	V	T	I	M	Q	M	D	V	G	L	D	T	G	D	M	L	Y	K	L	S	C	P	I	T	A	E	D	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	F	S	F	Y	Y	R	H	L	I	Y	D	E	I	L	Q	L	A	P	A	G	A	F	N	L	H	G	S	L	L	P	K	Y	R	G	R	A	P	L	N	W	V	L	V	N	G	E	T	E	T	G	V	T	L	H	R	M	V	K	R	A	D	A	G	A	I	V	A	Q	L	R	I	A	I	A	P	D	D	I
Template Known Secondary structure							S			S								T	T		T	T							S	S	S	T	T	T	T		S	S									T	T		S											S	S	T	T	T	S												T	T
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		S	G	T	L	Y	D	K	L	A	E	L	G	P	Q	G	L	I	T	T	L	K	Q	L	A	D	G	T	A	K	P	E	V	Q	D	E	T	L	V	T	Y	A	E	K	L	S	K	E	E	A	R	I	D	W	S	L	S	A	A	Q	L	E	R	C	I	R	A	F	.	N	P	W	P	M	S	W	L	E	I	E	G
Query Conservation																																																																					.
Alig confidence																																																																					.
Template Conservation
Template Sequence		A	I	T	L	H	H	K	L	C	H	A	A	R	Q	L	L	E	Q	T	L	P	A	I	K	H	G	N	I	L	E	I	A	Q	R	E	N	E	A	T	C	F	G	R	R	T	P	D	D	S	F	L	E	W	H	K	P	A	S	V	L	H	N	M	V	R	A	V	A	D	P	W	P	G	A	F	S	Y	V	G	N
Template Known Secondary structure																											T					B				T	T	T									G	G	G	G	B			T	T	S	B											T		T	T	S								T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	V	K	V	W	K	A	S	V	I	D	T	A	T	N	A	A	P	G	T	I	L	E	A	N	K	Q	G	I	Q	V	A	T	G	D	G	I	L	N	L	L	S	L	Q	P	A	G	K	K	A	M	S	A	Q	D	L	L	N	S	R	R	E	W	F	V	P	G	N	R	L
Query Conservation
Alig confidence																													.	.																																		.	.
Template Conservation																													.	.																																		.	.
Template Sequence		Q	K	F	T	V	W	S	S	R	V	H	P	H	A	S	K	A	Q	P	G	S	V	I	S	V	A	P	.	.	L	L	I	A	C	G	D	G	A	L	E	I	V	T	G	Q	A	G	D	G	I	T	M	Q	G	S	Q	L	A	Q	T	L	G	.	.	L	V	Q	G	S	R	L
Template Known Secondary structure																	S	S		T	T	S					T	T	.	.						S	B	S										T	T	S											T	T	T	.	.		S	S	S
Template Predicted Secondary structure																													.	.																																		.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.			.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.			.	.	300	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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