Job Description P29013 Confidence 79.72% Date Thu Jan 5 11:45:33 GMT 2012 Rank 6 Aligned Residues 168 % Identity 16% Template c3se6A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endoplasmic reticulum aminopeptidase 2; PDBTitle: crystal structure of the human endoplasmic reticulum aminopeptidase 2 Resolution 3.08 Å

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		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.													.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	N	E	G	W	A	T	F	W	H	Y	T	I	L	N	H	L	Y	D	E	G	K	V	T	E	R	F	M	L	E	F	L	H	S	H	T	N	V	V	F	Q	P	P	Y	N	S	P	W	Y	S	G	I	N	P	.	.	.	.	.	.	.	.	.	.	.	.	Y	A	L	G	F	A	M	F	Q	D	I	K	R	I
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.
Template Sequence		L	N	E	G	F	A	K	Y	M	E	L	I	A	V	N	A	T	.	.	Y	P	E	L	Q	F	D	D	Y	F	L	N	V	C	F	E	V	I	T	K	D	S	L	N	S	S	R	P	I	S	K	P	A	E	T	P	T	Q	I	Q	E	M	F	D	E	V	S	Y	N	K	G	A	C	I	L	N	M	L	K	D	F
Template Known Secondary structure																			.	.		G	G	G															T	T	T	T	S	T	T				S	S					S							T	S	S
Template Predicted Secondary structure																			.	.
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.			.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		C	Q	S	P	T	E	E	D	K	Y	W	F	P	D	I	A	G	S	D	W	L	E	T	L	H	F	A	M	R	D	F	.	K	D	E	S	F	I	S	Q	F	L	S	P	K	V	M	R	D	F	R	F	F	T	V	L	D	D	D	R	H	N	Y	L	E	I	S	A	I	H	N	E	E	G	Y	R	E	I	R	N
Query Conservation																																	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.						.													.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.													.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	E	K	F	Q	K	G	I	I	Q	Y	L	K	K	F	S	Y	.	R	N	A	K	N	D	D	L	W	S	S	L	.	.	.	.	.	.	S	N	S	L	G	E	N	A	E	V	K	E	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	T	.													.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.													.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		469																			470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.		.	.	490	.	.	.	.	.	.	.	.	.							500	.	.	.	.	.	.	.	.	.	510	.
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	S	S	Q	Y	N	L	S	N	L	E	P	N	I	Q	I	W	N	V	D	L	R	G	D	R	S	L	T	L	R	Y	I	P	H	N	R	A	P	L	D	R	G	R	K	E	V	L	K	H	V	H	R	L	W	G	F	D	V	M	L	E	Q	Q	N	E	D	G	S	I	E	L	L	E	R	C
Query Conservation
Alig confidence		.																			.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																			.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	M	M	T	T	W	T	L	Q	K	G	I	P	L	L	V	V	K	Q	.	.	.	.	D	G	C	S	L	R	L	Q	Q	E	R	F	L	Q	G	Q	E	R	.	.	.	.	.	.	.	.	.	.	.	Y	L	W	H	I	P	L	T	Y	S	T	S	S	S	N	V	I	H	R	H	I	L	K	S
Template Known Secondary structure		.								S		S									.	.	.	.		T	T															S	.	.	.	.	.	.	.	.	.	.	.												S	S											S
Template Predicted Secondary structure		.																			.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			537	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.					.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.												.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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