Return to main results Retrieve Phyre Job Id

Job DescriptionP29013
Confidence83.58%DateThu Jan 5 11:45:33 GMT 2012
Rank5Aligned Residues59
% Identity24%Templatec3o0yC_
PDB info PDB header:lipid binding proteinChain: C: PDB Molecule:lipoprotein; PDBTitle: the crystal structure of the putative lipoprotein from colwellia2 psychrerythraea
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   283......290.........300....... ..310...... ...320.
Predicted Secondary structure 








.............................
............




Query SS confidence 
























. . . . . . . . . . . . . . . . . . . . . . . . . . . . .








. . . . . . . . . . . .




Query Sequence  EGWATFWHYTILNHLYDEGKVTERF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . MLEFLHSHT. . . . . . . . . . . . NVVFQ
Query Conservation 







  

 

     
   
............................. 



  

............ 

  
Alig confidence 







.















.............................








............




Template Conservation 







. 
  
 
    

   

 
   
 

 
 


 


  


 


   
          
  

 

   
Template Sequence  EGWALYSE. QVAYELGMYENDPFGDLGRLQAELFRAVRLVVDTGLHDKRWTREQAISYMSEQTGTAESDVVAEIERYMAW
Template Known Secondary structure  .TTTTTT
TT


S


S
Template Predicted Secondary structure  .





















Template SS confidence 















































































   471....... .480.........490.........500.........510.........520.........530.........540.........
 
   322.......330.........340.........
Predicted Secondary structure 












Query SS confidence 



























Query Sequence  PPYNSPWYSGINPYALGFAMFQDIKRIC
Query Conservation       
    



 

  
  


 
 
Alig confidence 
.......



















Template Conservation 
.......


 

  
   
  

  
Template Sequence  P. . . . . . . GQALGYKLGMLKILSLREQA
Template Known Secondary structure  T.......TGGG
Template Predicted Secondary structure 
.......
Template SS confidence 



























   550 .........560.........570
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions