 |
Job Description | P29013 | Confidence | 11.97% | Date | Thu Jan 5 11:45:33 GMT 2012 |
Rank | 57 | Aligned Residues | 31 |
% Identity | 29% | Template | c3ezkB_ |
PDB info |
PDB header:hydrolase | Chain: B: PDB Molecule:dna packaging protein gp17; |
PDBTitle: bacteriophage t4 gp17 motor assembly based on crystal2 structures and cryo-em reconstructions
|
Resolution | 34.00 Å |
|
  |   |
237 | . | . | 240 | . | |
|
|
. | . | . | . | . | . | . | . | 250 | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  | . | . | . |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | E | P | Q | E | . |
. |
. |
N | L | L | Y | F | M | E | K | N | A | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | L | E | S | W | Q | R | E | I | L | R | I | V | R | K |
Query Conservation |   |
|   |
|
|   | . | . | . |
|
|
|   |
|
|   |   |   |
|
| . | . | . | . | . | . | . | . | . | . | . |   |
|
|
|
|
|
|
|
|
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
Template Sequence |   |
E | E | W | K | K | C | R | D | D | I | V | Y | F | A | E | T | Y | C | A | I | T | H | I | D | Y | G | V | I | K | V | Q | L | R | D | Y | Q | R | D | M | L | K | I | M | S | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|  |  |  |
| S | S | S |
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
108 | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|