Job Description P29013 Confidence 31.01% Date Thu Jan 5 11:45:33 GMT 2012 Rank 14 Aligned Residues 79 % Identity 18% Template c2xdtA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endoplasmic reticulum aminopeptidase 1; PDBTitle: crystal structure of the soluble domain of human2 endoplasmic reticulum aminopeptidase 1 erap1 Resolution 2.70 Å

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		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.													.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	N	E	G	W	A	T	F	W	H	Y	T	I	L	N	H	L	Y	D	E	G	K	V	T	E	R	F	M	L	E	F	L	H	S	H	T	N	V	V	F	Q	P	P	Y	N	S	P	W	Y	S	G	I	N	P	.	.	.	.	.	.	.	.	.	.	.	.	Y	A	L	G	F	A	M	F	Q	D	I	K	R	I
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.
Template Sequence		L	N	E	G	F	A	K	F	M	E	F	V	S	V	S	V	T	H	P	E	L	K	V	G	D	Y	F	F	G	K	C	F	D	.	.	A	M	E	V	D	A	L	N	S	S	H	P	V	S	T	P	V	E	N	P	A	Q	I	R	E	M	F	D	D	V	S	Y	D	K	G	A	C	I	L	N	M	L	R	E	Y
Template Known Secondary structure																				G	G	G		G	G	G	G								.	.						T	S	T	T				S	S					S							T	S	S
Template Predicted Secondary structure																																			.	.
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.			.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	Q	S	P	T	E	E	D	K	Y	W	F	P	D	I	A	G	S	D	W	L	E	T	L	H	F	A	M	R	D	F
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	D	A	F	K	S	G	I	V	Q	Y
Template Known Secondary structure		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		452																			.	.	.	.	.	.	.	460	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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