 |
Job Description | P29013 | Confidence | 11.07% | Date | Thu Jan 5 11:45:33 GMT 2012 |
Rank | 65 | Aligned Residues | 34 |
% Identity | 24% | Template | c2dmnA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:homeobox protein tgif2lx; |
PDBTitle: the solution structure of the homeobox domain of human2 homeobox protein tgif2lx
|
Resolution | UNK |
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 40 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | M | N | K | D | T | T | R | L | S | D | G | P | D | W | T | F | D | L | L | D | V | Y | L | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | I | D | R | V | A | K | L | Y | R | L | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |
|
|   |
|   |
|   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|   |   |   | . | . | . |
|   |   |
|   |   |   |
|   |   |   |
|   |
|   |   |   |   |
|
|
|
|   |   |   |   |   |   |
|
|   |   |   |   |
|   |
Template Sequence |   |
S | G | K | K | R | K | G | N | L | . |
. |
. |
P | A | E | S | V | K | I | L | R | D | W | M | Y | K | H | R | F | K | A | Y | P | S | E | E | E | K | Q | M | L | S | E | K | T | N | L | S |
Template Known Secondary structure |   |
|
|
|
|
|
| S | S |
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | |
|
|
. | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|