Job Description P08204 Confidence 100.00% Date Thu Jan 5 11:00:58 GMT 2012 Rank 19 Aligned Residues 243 % Identity 16% Template d2p3ra1 SCOP info Ribonuclease H-like motif Actin-like ATPase domain Glycerol kinase Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	I	A	I	G	L	D	F	G	S	D	S	V	R	A	L	A	V	D	C	A	T	G	E	E	I	A	T	S	V	E	W	Y	P	R	W	Q	K	G	Q	F	C	D	A	P	N	N	Q	F	R	H	H	P	R	D	Y	I	E	S	M	E	A	A	L	K	T	V	L	A	E	L	S	V	E	Q	R	A	A	V
Query Conservation
Alig confidence																						.															.	.	.	.	.	.																																					.
Template Conservation																						.															.	.	.	.	.	.																																					.
Template Sequence		K	K	Y	I	V	A	L	D	Q	G	T	T	S	S	R	A	V	V	M	D	.	H	D	A	N	I	I	S	V	S	Q	R	E	F	E	.	.	.	.	.	.	Q	I	Y	P	K	P	G	W	V	E	H	D	P	M	E	I	W	A	T	Q	S	S	T	L	V	E	V	L	A	K	A	D	I	S	S	D	.	Q	I
Template Known Secondary structure												S	S									.	T	T													.	.	.	.	.	.		B		S	S	T	T																								T	T			G	G	.	G
Template Predicted Secondary structure																						.															.	.	.	.	.	.																																					.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.							.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		V	G	I	G	V	D	S	T	G	S	T	P	A	P	I	D	A	D	.	G	N	V	L	A	L	R	P	E	F	A	E	N	P	N	A	M	F	V	L	W	K	D	H	T	A	V	E	E	A	E	E	I	T	R	L	C	H	A	P	G	N	V	D	Y	S	R	Y	I	G	G	I	Y	S	S	E	W	F	W	A	K
Query Conservation																				.
Alig confidence																				.					.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Sequence		A	A	I	G	I	T	N	Q	R	E	T	T	I	V	W	E	K	E	T	G	K	P	I	.	.	.	.	.	.	.	.	.	.	.	Y	N	A	I	V	W	Q	C	R	R	T	A	E	I	C	E	H	L	K	R	D	G	.	.	.	L	E	D	Y	I	R	S	N	T	G	L	V	I	D	P	Y	F	S	G	T	K
Template Known Secondary structure										S	S		B					T	T	T			B	S	.	.	.	.	.	.	.	.	.	.	.	S					T	T			T	T										T	T	.	.	.													S	S	T	T	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.												.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.					.	.	.	.	180	.	.	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																		.	.	.	.																.	.
Query SS confidence																		.	.	.	.																.	.
Query Sequence		I	L	H	V	T	R	Q	D	S	A	V	A	Q	S	A	A	.	.	.	.	S	W	I	E	L	C	D	W	V	P	A	L	L	S	G	.	.	T	T	R	P	Q	D	I	R	R	G	R	C	S	A	G	H	K	S	L	W	H	E	S	W	G	G	L	P	P	A	S	F	F	D	E	L	D	P	I	L	N	R	H
Query Conservation																		.	.	.	.																.	.
Alig confidence																		.	.	.	.																.	.												.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.																				.	.	.	.	.	.
Template Sequence		V	K	W	I	L	D	H	V	E	G	S	R	E	R	A	R	R	G	E	L	L	F	G	T	V	D	T	W	L	I	W	K	M	T	Q	G	R	V	H	V	T	D	Y	T	N	A	S	R	.	.	.	.	.	.	T	M	L	F	N	I	H	T	L	D	W	D	D	K	M	L	E	V	L	.	.	.	.	.	.	D
Template Known Secondary structure									S	T	T							T	T																T	T	T	S											T	.	.	.	.	.	.	T	S	S			T	T	T	T											.	.	.	.	.	.	T
Template Predicted Secondary structure																																																		.	.	.	.	.	.																				.	.	.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.							.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.							.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	S	P	L	F	T	D	T	W	T	A	D	I	P	V	G	T	L	C	P	E	W	A	Q	R	L	G	L	P	E	S	V	V	I	S	G	G	A	F	D	C	H	M	G	A	V	G
Query Conservation
Alig confidence																															.	.	.	.
Template Conservation																															.	.	.	.
Template Sequence		I	P	R	E	M	L	P	E	V	R	R	S	S	E	V	Y	G	Q	T	N	I	D	G	K	G	G	T	R	I	.	.	.	.	P	I	S	G	I	A	G	D	Q	Q	A	A	L	F	G
Template Known Secondary structure				G	G	G							S									T	T		T	T	S				.	.	.	.
Template Predicted Secondary structure																															.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.					.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions