 |
Job Description | P08204 | Confidence | 97.45% | Date | Thu Jan 5 11:00:58 GMT 2012 |
Rank | 50 | Aligned Residues | 65 |
% Identity | 26% | Template | d2aa4a1 |
SCOP info | Ribonuclease H-like motif
| Actin-like ATPase domain
| ROK
|
Resolution | 2.20 |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | A | I | A | I | G | L | D | F | G | S | D | S | V | R | A | L | A | V | D | C | A | T | G | E | E | I | A | T | S | V | E | W | Y | P | R | W | Q | K | G | Q | F | C | D | A | P | N | N | Q | F | R | H | H | P | R | D | Y | I | E | S | M | E | A | A | L | K | T | V | L | A | E | L | S | V | E | Q | R | A | A | V |
Query Conservation |   |
|   |   |   |
|
|
|
|
|
|
|
|
|   |
|   |   |
|   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
Template Conservation |   |
|   |   | . |
|
|
|
|
|
|   |
|   |
|   |   |   |   |   |
| . |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   | . | . | . | . |   |   |   |
Template Sequence |   |
M | T | T | . |
L | A | I | D | I | G | G | T | K | L | A | A | A | L | I | G | . |
A | D | G | Q | I | R | D | R | R | E | L | P | T | P | A | S | Q | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | E | A | L | R | D | A | L | S | A | L | V | S | P | L | Q | . |
. |
. |
. |
A | H | A |
Template Known Secondary structure |   |
|
|  | . |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |
| . | T | T |
|
|  |  |  |  |  |  |  |  |
|
| S | S |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | G | . | . | . | . | G | G |
|
Template Predicted Secondary structure |   |
|  |  | . |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | |
. | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | |
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
|
|
|
. | . | . |
  |
  |   |
81 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | G | I | G | V | D | S | T | G |
Query Conservation |   |
  |
|
|   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|   |   |
|
|
Template Sequence |   |
Q | R | V | A | I | A | S | T | G |
Template Known Secondary structure |   |
S |  |  |  |  |  |  | S | S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
  |   |
57 | . | . | 60 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|