 |
Job Description | P08204 | Confidence | 92.45% | Date | Thu Jan 5 11:00:58 GMT 2012 |
Rank | 114 | Aligned Residues | 106 |
% Identity | 13% | Template | d1saza2 |
SCOP info | Ribonuclease H-like motif
| Actin-like ATPase domain
| Acetokinase-like
|
Resolution | 2.50 |
|
 |
  |   |
409 | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | |
. | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | L | K | G | V | I | T | D | L | N | L | A | T | D | A | P | L | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | G | G | L | I | A | A | T | A | F | G | A | R | A | I | M | E | C | F | T | D | . |
Q | G | I | A | V | N | N | V | M | A | L | G | G | I | A | R | K | N | Q | V | I | M | Q | A | C | C | D | V | L | N |
Query Conservation |   |
  |
|
|
|   |   |   |
|
|   |   |   |   |   |   |   |   |
| . | . | . | . | . | . | . | . | . | . |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |   | . |   |
|   |   |   |   |   |
|   |   |   |
|
|
|
|   |   |
|   |   |   |   |
|
|   |
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|
|   |
|   |   |
|
|   |
|   |
|
|
|   |   |   |   |   |   |
|
|   |   |
|   |
|
|   |
|
|   |   |
|   |
|
|
|   |
|
|
|   |
|
|   |
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |   |
|   |   |   |
|   |
Template Sequence |   |
V | G | N | G | G | L | V | A | Y | L | G | T | S | D | A | R | E | V | V | R | R | I | K | Q | G | D | E | W | A | K | R | V | Y | R | A | X | A | Y | Q | I | A | K | W | I | G | K | X | A | A | V | L | K | G | E | V | D | F | I | V | L | T | G | G | L | A | H | E | K | E | F | L | V | P | W | I | T | K | R | V | S |
Template Known Secondary structure |   |
T | T | S |
| T |  |  |  |  |  | S |
|
|
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
| S |  |  |  |  |  |  | G | G | G | G |
| T | T | T |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
242 | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . |
  |
  |   |
478 | |
|
. | 480 | . | . | |
. | . | . | . | . | . | . | 490 | . | |
. | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . |
Predicted Secondary structure |   |
| . | . |  |  |  |  | . |  |
|
|
|
|  |  |  |  | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
| . |
. |
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | . |
. |
P | L | Q | I | . |
V | A | S | D | Q | C | C | A | L | . |
G | A | A | I | F | A | A | V | A | A | K | V | H | A | D | I | P | S | A | Q | Q | K | M |
Query Conservation |   |
  | . | . |
|
|   |   | . |   |   |   |   |
|   |   |
|   | . |
|
|
|   |
|
|   |   |   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |
Alig confidence |   |
| . | . |
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|   |
|   |
|
|   |
|
|   |   |
|
|
|   |
|
|
|
|
|
|   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
F | I | A | P | V | L | V | F | P | G | S | N | E | E | K | A | L | A | L | S | A | L | R | V | L | R | G | E | E | K | P | K | N | Y | S | E | E | S | R | R | W |
Template Known Secondary structure |   |
T | T | S |
|  |  |  |  |  | B |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
|
|
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
322 | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|