Job Description P08204 Confidence 81.15% Date Thu Jan 5 11:00:58 GMT 2012 Rank 146 Aligned Residues 64 % Identity 27% Template c3psiA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(239-1451) Resolution 3.30 Å

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		4	.	.	.	.	.	10						.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.
Query SS confidence									.	.	.	.	.
Query Sequence		A	I	G	L	D	F	G	.	.	.	.	.	S	D	S	V	R	A	L	A	V	D	C	A	T	G	E	E	I	A	T	S	V	E	W	Y	P	R	W	Q	K	G	Q	F	C	D	A	P	N	N	Q	F	R	H	H	P	R	D	Y	I	E	S	M	E	A	A	L	K	T	V	L	A	E	L	S	V	E	Q	R	A
Query Conservation									.	.	.	.	.
Alig confidence									.	.	.	.	.											.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation																								.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Sequence		I	L	S	L	T	C	G	Q	G	R	F	G	A	D	A	I	I	A	V	Y	V	N	.	R	K	G	D	F	I	R	D	Y	K	I	V	D	N	P	F	D	K	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	K	F	E	D	T	L	D	N	I	I	Q	S	C	Q	P	.	.	.	.
Template Known Secondary structure								T	T			T	T	T	T									.	T	T	S										S		T	T		S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																	.	.	.	.
Template Predicted Secondary structure																								.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template SS confidence
		750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.		.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.																	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	V	G	I	G	V	D	S	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	A	I	G	I	N	G	P	N	P
Template Known Secondary structure		S							S	S	T
Template Predicted Secondary structure
Template SS confidence
		809	810	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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