Job Description P08204 Confidence 100.00% Date Thu Jan 5 11:00:58 GMT 2012 Rank 5 Aligned Residues 479 % Identity 22% Template c3ifrB_ PDB info PDB header:transferase Chain: B: PDB Molecule:carbohydrate kinase, fggy; PDBTitle: the crystal structure of xylulose kinase from rhodospirillum rubrum Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	A	I	G	L	D	F	G	S	D	S	V	R	A	L	A	V	D	C	A	T	G	E	E	I	A	T	S	V	E	W	Y	P	R	W	Q	K	G	Q	F	C	D	A	P	N	N	Q	F	R	H	H	P	R	D	Y	I	E	S	M	E	A	A	L	K	T	V	L	A	E	L	S	V	E	Q	R	A	A	V	V
Query Conservation
Alig confidence																					.															.	.	.	.	.	.																																					.
Template Conservation																					.															.	.	.	.	.	.																																					.
Template Sequence		R	Q	V	I	G	L	D	I	G	T	T	S	T	I	A	I	L	V	R	.	L	P	D	T	V	V	A	V	A	S	R	P	T	T	.	.	.	.	.	.	L	S	S	P	H	P	G	W	A	E	E	D	P	A	Q	W	W	D	N	A	R	A	V	L	A	E	L	K	T	T	A	G	E	S	D	W	.	R	P	G
Template Known Secondary structure											S	S									.	T	T	T												.	.	.	.	.	.		B		S	S	T	T																									T	G	G	G		.
Template Predicted Secondary structure																					.															.	.	.	.	.	.																																					.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.							40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	G	V	D	S	T	G	S	T	P	A	P	I	D	A	D	G	N	V	L	A	L	R	P	E	F	A	E	N	P	N	A	M	F	V	L	W	K	D	H	T	A	V	E	E	A	E	E	I	T	R	L	C	H	A	P	G	N	V	D	Y	S	R	Y	I	G	G	I	Y	S	S	E	W	F	W	A	K	I	L
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Sequence		G	I	C	V	T	G	X	L	P	A	V	V	L	L	D	D	R	G	A	V	L	.	.	.	.	.	.	.	.	.	.	.	R	P	S	I	Q	Q	S	D	G	R	C	G	D	E	V	A	E	L	R	A	E	V	.	.	.	D	S	E	A	F	L	A	R	T	G	N	G	V	T	Q	Q	L	V	T	A	K	L	R
Template Known Secondary structure									S	S		B					T	T	S		B		.	.	.	.	.	.	.	.	.	.	.	S					T	T			T	T											S	.	.	.										S	S		S	S	T	T	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.												100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	T	R	Q	D	S	A	V	A	Q	S	A	A	S	W	I	E	L	C	D	W	V	P	A	L	L	S	G	T	T	R	P	Q	D	I	R	R	G	R	C	S	A	G	H	K	S	L	W	H	E	S	W	G	G	L	P	P	A	S	F	F	D	E	L	D	P	I	L	N	R	H	L	P	S	P	L	F	T	D
Query Conservation
Alig confidence																																										.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.																				.	.	.	.	.	.
Template Sequence		W	I	E	R	H	E	P	A	V	F	G	A	I	A	T	V	C	G	S	Y	D	Y	I	N	X	L	L	T	G	E	R	V	V	D	R	N	W	A	L	E	.	.	.	.	.	.	G	G	F	I	D	L	A	S	G	T	V	E	A	D	L	V	A	L	A	.	.	.	.	.	.	H	I	P	P	S	A	V	P	P
Template Known Secondary structure													T		S																											.	.	.	.	.	.		T				T	T	T	T										T	.	.	.	.	.	.	T	S		G	G	G	S
Template Predicted Secondary structure																																										.	.	.	.	.	.																				.	.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.							.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.							.	.	.	.	.	.	210	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		T	W	T	A	D	I	P	V	G	T	L	C	P	E	W	A	Q	R	L	G	L	P	E	S	V	V	I	S	G	G	A	F	D	C	H	M	G	A	V	G	A	G	A	.	Q	P	N	A	L	V	K	V	I	G	T	S	T	C	D	I	L	I	A	D	K	Q	S	V	G	E	R	A	V	K	G	I	C	G	Q	V
Query Conservation																																													.
Alig confidence																																													.																										.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.
Template Sequence		A	H	P	T	H	R	V	L	G	A	V	T	A	E	A	A	A	L	T	G	L	P	T	G	L	P	V	Y	G	G	A	A	D	H	I	A	S	A	L	A	A	G	I	T	R	P	G	D	V	L	L	K	F	G	G	A	G	D	I	I	V	A	S	A	T	A	K	S	R	.	.	.	.	.	.	.	.	L	Y	L
Template Known Secondary structure					T	T	S																	T	T																	T	T			S	T	T							S	S	S							B	S	S					.	.	.	.	.	.	.	.		B
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.									.	.	.
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	S	V	V	P	G	F	I	G	L	E	A	G	Q	S	A	F	G	D	I	Y	A	W	F	G	R	V	L	G	W	P	L	E	Q	L	A	A	Q	H	P	E	L	K	T	Q	I	N	A	S	Q	K	Q	L	L	P	A	L	T	E	A	W	A	K	N	P	S	L	D	H	L	P	V	V	L	D	W	F	N	G
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	Y	H	L	V	P	G	L	Y	A	P	N	G	C	X	A	A	T	G	S	A	L	N	W	L	A	K	L	L	A	P	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	E	A	A	H	A	Q	L	D	A	L	A	A	E	V	P	A	G	A	D	G	L	V	C	L	P	Y	F	L	G
Template Known Secondary structure			B		S	S	T	T		B							S		S	S											S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T												T	S		T	T	G	G	G							T	T
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.																		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	T	P	N	A	N	Q	R	L	K	G	V	I	T	D	L	N	L	A	T	D	A	P	L	L	F	G	G	L	I	A	A	T	A	F	G	A	R	A	I	M	E	C	F	T	D	Q	G	I	A	V	N	N	V	M	A	L	G	G	I	A	R	K	N	Q	V	I	M	Q	A	C	C	D	V	L	N	R	P	L
Query Conservation
Alig confidence		.	.	.	.	.	.																																																									.
Template Conservation		.	.	.	.	.	.																																																									.
Template Sequence		.	.	.	.	.	.	D	P	F	A	S	G	T	F	T	G	L	S	L	S	H	T	R	G	H	L	W	R	A	L	L	E	A	V	A	L	A	F	R	H	H	V	A	V	L	D	D	I	G	H	A	P	Q	R	F	F	A	S	D	G	G	T	.	R	S	R	V	W	X	G	I	X	A	D	V	L	Q	R	P	V
Template Known Secondary structure		.	.	.	.	.	.		T	T							S			T	T																													T										S	G	G	G	.	G													T	S
Template Predicted Secondary structure		.	.	.	.	.	.																																																									.
Template SS confidence
								356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.		.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	V	A	S	D	Q	C	C	A	L	G	A	A	I	F	A	A	V	A	A	K	V	H	A	D	I	P	S	A	Q	Q	K	M	A	S	A	V	E	K	T	L	Q	P	C	S	E	Q	A	Q	R	F	E	Q	L	Y	R	R	Y	Q	Q	W	A	M	S	A	E	Q	H	Y	L	P
Query Conservation
Alig confidence																																.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.
Template Sequence		Q	L	L	A	N	P	L	G	S	A	V	G	A	A	W	V	A	A	I	G	G	G	D	D	L	G	W	D	D	V	.	.	.	.	.	.	R	T	G	E	K	I	T	P	D	P	A	K	A	E	V	Y	D	R	L	Y	R	D	F	S	A	L	Y	A	T	L	H	P	F	F	H	R
Template Known Secondary structure							T	T														T	T	S	S	S		G	G	G		.	.	.	.	.	.										G	G	G
Template Predicted Secondary structure																																.	.	.	.	.	.
Template SS confidence
		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.							.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.