Job Description P08204 Confidence 100.00% Date Thu Jan 5 11:00:58 GMT 2012 Rank 16 Aligned Residues 471 % Identity 17% Template c3i8bA_ PDB info PDB header:transferase Chain: A: PDB Molecule:xylulose kinase; PDBTitle: the crystal structure of xylulose kinase from2 bifidobacterium adolescentis Resolution 2.00 Å

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		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		M	A	.	I	A	I	G	L	D	F	G	S	D	S	V	R	A	L	A	V	D	C	A	T	G	E	E	I	A	T	S	V	E	W	Y	P	R	W	Q	K	G	Q	F	C	D	A	P	N	N	Q	F	R	H	H	P	R	D	Y	I	E	S	M	E	A	A	L	K	T	V	L	A	E	L	S	V	E	Q	R	A	A
Query Conservation				.
Alig confidence				.																																		.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Sequence		L	R	T	L	V	A	G	V	D	T	S	T	Q	S	C	K	V	R	V	T	D	A	E	T	G	E	L	V	R	F	G	Q	A	K	H	P	.	.	.	.	.	.	.	.	.	.	.	.	N	G	T	S	V	D	P	S	Y	W	W	S	A	F	Q	E	A	A	E	Q	A	.	.	.	.	.	.	G	G	L	D	D
Template Known Secondary structure			S										S	S									T	T	T													.	.	.	.	.	.	.	.	.	.	.	.	S	S	S				T														T	.	.	.	.	.	.	T		S	T	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.													.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.							.	60	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.														140	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	G	I	G	V	D	S	T	G	S	T	P	A	P	I	D	A	D	G	N	V	L	A	L	R	P	E	F	A	E	N	P	N	A	M	F	V	L	W	K	D	H	T	A	V	E	E	A	E	E	I	T	R	L	C	H	A	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	D	Y	S	R	Y
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	A	L	A	V	G	G	Q	Q	H	G	X	V	I	L	D	N	Q	G	N	V	I	.	.	.	.	.	.	.	.	.	.	.	R	D	A	X	L	W	N	D	T	S	S	A	P	Q	A	A	A	L	I	E	K	L	G	A	A	P	A	Q	D	G	E	P	E	D	P	I	A	R	G	K	Q	R	W	V	K	A
Template Known Secondary structure											S	S		B					T	T	S		B		.	.	.	.	.	.	.	.	.	.	.	S					T	T			T	T														S				T	T			S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.												.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.														.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	G	G	I	Y	S	S	E	W	F	W	A	K	I	L	H	V	T	R	Q	D	S	A	V	A	Q	S	A	A	S	W	I	E	L	C	D	W	V	P	A	L	L	S	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	P	Q	D	I	R	R	G	R	C	S	A	G	H	K	S	L	W	H	E	S
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.
Template Sequence		V	G	S	S	P	V	A	S	Y	T	L	T	K	V	A	W	V	A	E	N	E	P	E	N	V	K	K	I	A	A	I	C	L	P	H	D	W	L	S	W	R	I	A	G	Y	G	P	V	A	E	G	E	D	A	H	L	E	A	L	F	T	D	R	S	D	A	S	G	.	.	.	.	.	.	T	I	Y	Y	D	A
Template Known Secondary structure			S	S				T	T	S																	T	T		S														T	T						T	T	S				G	G	G									T	T	.	.	.	.	.	.	S	S	S			T
Template Predicted Secondary structure																																																																						.	.	.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200							.	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230							.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.
Query Sequence		W	G	G	L	P	P	A	S	F	F	D	E	L	D	P	I	L	.	.	.	.	.	.	N	R	H	L	P	S	P	L	F	T	D	T	W	T	A	D	I	P	V	G	T	L	C	P	E	W	A	Q	R	L	G	L	P	E	S	V	V	I	S	G	G	A	F	D	C	H	M	G	A	V	G	A	G	A	Q	P	N
Query Conservation																			.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.
Template Conservation
Template Sequence		A	S	N	E	Y	R	R	D	L	I	A	X	V	L	E	A	A	E	G	A	K	A	A	Q	S	H	A	E	A	I	V	L	P	T	V	L	G	P	R	D	A	A	P	V	K	A	D	P	A	I	A	G	K	N	V	E	G	G	C	L	L	A	P	G	G	G	D	N	A	X	A	S	L	G	L	G	X	A	V	G
Template Known Secondary structure		T	T	T																											S	B							T	T				S	S				T	T	T	T	T	T	T	S	T	T																		T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	V	K	V	I	G	T	S	T	C	D	I	L	I	A	D	K	Q	S	V	G	E	R	A	V	K	G	I	C	G	Q	V	D	G	S	V	V	P	G	F	I	G	L	E	A	G	Q	S	A	F	G	D	I	Y	A	W	F	G	R	V	L	G	W	P	L	E	Q	L	A	A	Q	H	P	E	L	K	T	Q	I
Query Conservation
Alig confidence																																.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	S	I	S	L	G	T	S	G	V	A	A	A	I	S	E	N	P	T	Y	D	L	T	G	A	V	S	G	F	.	.	.	.	.	A	D	C	T	G	H	Y	L	P	L	A	C	T	I	N	G	S	R	I	L	D	A	G	R	A	A	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								S	S	S							B	S	S					T	T	S		S				.	.	.	.	.			S	S	S	S								S		S	T											T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.						.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	S	Q	K	Q	L	L	P	A	L	T	E	A	W	A	K	N	P	S	L	D	H	L	P	V	V	L	D	W	F	N	G	R	R	T	P	N	A	N	Q	R	L	K	G	V	I	T	D	L	N	L	A	T	D	A	P	L	L	F	G	G	L	I	A	A	T	A	F	G	A	R	A	I	M	E	C	F	T	D
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	V	D	Y	D	E	L	A	K	L	A	F	A	S	K	P	G	A	N	G	I	T	L	V	P	Y	F	D	G	E	R	T	P	N	R	P	N	A	T	A	T	F	S	G	X	T	L	A	N	T	T	R	E	N	L	A	R	A	F	V	E	G	L	L	C	S	Q	R	D	C	L	E	L	I	R	S
Template Known Secondary structure		.	.	.	.	.													S		T	T	G	G	G							T	T		B	T	T	T	T	B	T	T							S			T	T	T		S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	I	A	V	N	N	V	M	A	L	G	G	I	A	R	K	N	Q	V	I	M	Q	A	C	C	D	V	L	N	R	P	L	Q	I	V	A	S	D	Q	C	C	A	L	G	A	A	I	F	A	A	V	A	A	K	V	H	A	D	I	P	S	A	Q	Q	K	M	A	S	A	V	E	K	T	L	Q	P	C	S	E
Query Conservation
Alig confidence																	.																																																.						.
Template Conservation																	.																																																.						.
Template Sequence		L	G	A	S	I	T	R	I	L	L	I	G	G	G	A	.	K	S	E	A	I	R	T	L	A	P	S	I	L	G	X	D	V	T	R	P	A	T	D	E	Y	V	A	I	G	A	A	R	Q	A	A	W	V	L	S	G	E	T	E	P	P	A	W	.	Q	L	T	I	D	.	G	V	E	T	G	E	P	T	E	A
Template Known Secondary structure		T	T										S	G	G	G	.	G													T	S																											S	S					.						.
Template Predicted Secondary structure																	.																																																.						.
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.		.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.		.	.	.	.	.		.	.	.	490	.	.	.	.	.	.
		528	.	530	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	Q	R	F	E	Q	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Y	E	A	Y	A	K	A	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		497	.	.	500	.	.	.	.	.