Job Description P08204 Confidence 100.00% Date Thu Jan 5 11:00:58 GMT 2012 Rank 7 Aligned Residues 492 % Identity 16% Template c3hz6A_ PDB info PDB header:transferase Chain: A: PDB Molecule:xylulokinase; PDBTitle: crystal structure of xylulokinase from chromobacterium violaceum Resolution 1.65 Å

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		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		M	A	.	I	A	I	G	L	D	F	G	S	D	S	V	R	A	L	A	V	D	C	A	T	G	E	E	I	A	T	S	V	E	W	Y	P	R	W	Q	K	G	Q	F	C	D	A	P	N	N	Q	F	R	H	H	P	R	D	Y	I	E	S	M	E	A	A	L	K	T	V	L	A	E	L	S	V	E	Q	R	A	A
Query Conservation				.
Alig confidence				.																			.															.	.	.	.	.	.																																.	.
Template Conservation																							.															.	.	.	.	.	.																																.	.
Template Sequence		L	A	F	Y	I	A	T	F	D	I	G	T	T	E	V	K	A	A	L	A	D	.	R	D	G	G	L	H	F	Q	R	S	I	A	L	E	.	.	.	.	.	.	T	Y	G	D	G	N	G	P	V	E	Q	D	A	G	D	W	Y	D	A	V	Q	R	I	A	S	S	W	W	Q	S	G	.	.	V	D	A	R	R
Template Known Secondary structure													S	S									.	T	T	S												.	.	.	.	.	.		B	S	T	T	S	S																						T	T	T	.	.			G	G	G
Template Predicted Secondary structure																							.															.	.	.	.	.	.																																.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.							.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	G	I	G	V	D	S	T	G	S	T	P	A	P	I	D	A	D	G	N	V	L	A	L	R	P	E	F	A	E	N	P	N	A	M	F	V	L	W	K	D	H	T	A	V	E	E	A	E	E	I	T	R	L	C	H	A	P	G	N	V	D	Y	S	R	Y	I	G	G	I	Y	S	S	E	W	F	W	A	K
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Sequence		V	S	A	I	V	L	S	G	Q	X	Q	N	F	L	P	L	D	Q	D	H	E	P	L	.	.	.	.	.	.	.	.	.	.	.	H	R	A	V	L	Y	S	D	K	R	P	L	K	E	A	E	E	I	N	A	R	H	.	.	.	G	A	D	N	L	W	S	A	L	E	N	P	X	T	A	A	S	I	L	P	K
Template Known Secondary structure												S		B					T	T	S		B	S	.	.	.	.	.	.	.	.	.	.	.	S					T	T																.	.	.										S	S			S	T	T	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.												.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.				.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		I	L	H	V	T	R	Q	D	S	A	V	A	Q	S	A	A	S	.	W	I	E	L	C	D	W	V	P	A	L	L	S	G	T	T	R	P	Q	D	I	R	R	G	R	C	S	A	G	H	K	S	L	W	H	E	S	W	G	G	L	P	P	A	S	F	F	D	E	L	D	P	I	L	N	R	H	L	P	S	P	L
Query Conservation																			.
Alig confidence																			.																										.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.																				.	.	.	.	.	.
Template Sequence		L	V	F	W	R	A	S	F	P	Q	A	F	G	R	L	R	H	V	V	L	G	A	K	D	Y	V	V	L	R	L	T	G	R	H	A	T	D	R	T	N	A	S	T	.	.	.	.	.	.	T	G	L	Y	R	P	K	D	D	A	W	H	V	E	L	L	A	D	Y	.	.	.	.	.	.	G	F	S	L	D	L
Template Known Secondary structure														T	T							S											S												.	.	.	.	.	.	T	T				T	T	T	T										T	.	.	.	.	.	.	T			G	G	G
Template Predicted Secondary structure																																													.	.	.	.	.	.																				.	.	.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180							.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.							200	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		F	T	D	T	W	T	A	D	I	P	V	G	T	L	C	P	E	W	A	Q	R	L	G	L	P	E	S	V	V	I	S	G	G	A	F	D	C	H	M	G	A	V	G	A	G	A	.	Q	P	N	A	L	V	K	V	I	G	T	S	T	C	D	I	L	I	A	D	K	Q	S	V	G	E	R	A	V	K	G	I	C
Query Conservation																																																.
Alig confidence																																																.																																.	.
Template Conservation																																																																																.	.
Template Sequence		X	P	R	L	L	E	P	G	E	Q	V	G	G	V	S	A	L	A	A	R	Q	T	G	F	V	S	G	T	P	V	L	C	G	L	G	D	A	G	A	A	T	L	G	V	G	V	L	D	D	E	D	A	Y	L	H	L	G	T	T	G	W	L	A	R	L	T	Q	T	D	P	V	G	D	X	P	V	G	T	.	.
Template Known Secondary structure		S						T	T	S																	T	T																	T	T			S	T	T							S	S	S														S			S	S		.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	V	D	G	S	V	V	P	G	F	I	G	L	E	A	G	Q	S	A	F	G	D	I	Y	A	W	F	G	R	V	L	G	W	P	L	E	Q	L	A	A	Q	H	P	E	L	K	T	Q	I	N	A	S	Q	K	Q	L	L	P	A	L	T	E	A	W	A	K	N	P	S	L	D	H	L	P	V	V	L	D	W
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	F	R	L	A	G	I	I	A	G	K	T	L	Q	V	A	P	V	L	N	A	G	N	I	L	Q	W	A	L	T	L	V	G	H	R	P	G	E	D	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	Y	F	H	X	A	A	A	E	V	Q	G	V	T	V	P	D	G	L	L	F	V	P	Y
Template Known Secondary structure							S	S	S	T	T									S	S	S								G	G	G	G	T			T	T	S		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T					T	T
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.																.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	G	R	R	T	P	N	A	N	Q	R	L	K	G	V	I	T	D	L	N	L	A	T	D	A	P	L	L	F	G	G	L	I	A	A	T	A	F	G	A	R	A	I	M	E	C	F	T	D	Q	G	I	A	V	N	N	V	M	A	L	G	G	I	A	R	K	N	Q	V	I	M	Q	A	C	C	D	V	L	N
Query Conservation
Alig confidence																																																					.	.												.
Template Conservation																																																					.	.												.
Template Sequence		L	H	A	E	R	C	P	V	E	L	P	A	P	R	G	A	L	L	G	V	T	G	A	T	T	R	A	Q	I	L	L	A	V	L	E	G	A	A	L	S	L	R	W	C	A	E	L	L	G	X	E	.	.	K	V	G	L	L	K	V	V	G	G	G	.	A	R	S	E	A	W	L	R	X	I	A	D	N	L	N
Template Known Secondary structure		S	S		B		S	S	S		B	S	S										T	T																										T	G	G	.	.	G								S	G	G	.	G	G													T
Template Predicted Secondary structure																																																					.	.												.
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.			400	.	.	.	.	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
		478	.	480	.	.	.		.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		R	P	L	Q	I	V	.	A	S	D	Q	C	C	A	L	G	A	A	I	F	A	A	V	A	A	K	V	H	A	D	I	P	S	A	Q	Q	K	M	A	S	A	V	E	K	T	L	Q	P	C	S	E	Q	A	Q	R	F	E	Q	L	Y	R	R	Y	Q	Q	W	A	M	S	A	E	Q
Query Conservation								.
Alig confidence								.																																		.
Template Conservation																																										.
Template Sequence		V	S	L	L	V	K	P	D	A	H	L	H	P	L	R	G	L	A	A	L	A	A	V	E	L	E	W	S	H	S	I	Q	D	F	L	R	E	A	D	L	.	R	S	N	I	L	H	P	Q	P	C	D	E	G	R	R	R	R	K	F	E	R	F	K	Q	C	V	E	T	L	G	R
Template Known Secondary structure										G	G	G														T	T	S		S											T	.					B																									T
Template Predicted Secondary structure																																										.
Template SS confidence
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.		.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.