Job Description P08204 Confidence 100.00% Date Thu Jan 5 11:00:58 GMT 2012 Rank 18 Aligned Residues 458 % Identity 15% Template c3h6eB_ PDB info PDB header:transferase Chain: B: PDB Molecule:carbohydrate kinase, fggy; PDBTitle: the crystal structure of a carbohydrate kinase from novosphingobium2 aromaticivorans Resolution 2.50 Å

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		1	.			.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		M	A	.	.	I	A	I	G	L	D	F	G	S	D	S	V	R	A	L	A	V	D	C	A	T	G	E	E	I	A	T	S	V	E	W	Y	P	R	W	Q	K	G	Q	F	C	D	A	P	N	N	Q	F	R	H	H	P	R	D	Y	I	E	S	M	E	A	A	L	K	T	V	L	A	E	L	S	V	E	Q	R	A
Query Conservation				.	.
Alig confidence				.	.																			.																			.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Template Conservation																								.																			.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Template Sequence		L	S	T	G	A	T	I	V	I	D	L	G	K	T	L	S	K	V	S	L	W	D	.	L	D	G	R	X	L	D	R	Q	V	R	P	S	I	P	L	E	I	.	.	.	.	.	.	.	D	G	I	R	R	L	D	A	P	D	T	G	R	W	L	L	D	V	L	S	R	Y	.	.	.	.	.	.	.	A	D	H
Template Known Secondary structure														S	S									.	T	T	S																.	.	.	.	.	.	.	T	T																		G	G	G	.	.	.	.	.	.	.	T	T	S
Template Predicted Secondary structure																								.																			.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40								.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.								.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	V	G	I	G	V	D	S	T	G	S	T	P	A	P	I	D	A	D	G	N	V	L	A	L	R	P	E	F	A	E	N	P	N	A	M	F	V	L	W	K	D	H	T	A	V	E	E	A	E	E	I	T	R	L	C	H	A	P	G	N	V	D	Y	S	R	Y	I	G	G	I	Y	S	S	E	W	F	W	A
Query Conservation
Alig confidence																				.						.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation																				.						.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Sequence		P	V	T	T	I	V	P	V	G	H	G	A	G	I	A	A	L	T	.	D	G	R	L	A	.	.	.	.	.	.	.	.	.	.	.	F	P	P	L	D	Y	E	Q	S	I	P	E	A	V	X	A	D	Y	R	S	Q	R	D	P	.	.	.	.	F	A	R	T	G	S	P	A	L	P	D	G	L	N	I	G	S
Template Known Secondary structure												S	S							.	T	T			S	.	.	.	.	.	.	.	.	.	.	.	S			B		T	T	S												T	T				.	.	.	.										S	T	T	S	S
Template Predicted Secondary structure																				.						.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.												.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		K	I	L	H	V	T	R	Q	D	S	A	V	A	Q	S	A	A	S	W	I	E	L	C	D	W	V	P	A	L	L	S	G	T	T	R	P	Q	D	I	R	.	R	G	R	C	S	A	G	H	K	S	L	W	H	E	S	W	G	G	L	P	P	A	S	F	F	D	E	L	D	P	I	L	N	R	H	L	P	S	P
Query Conservation																																										.
Alig confidence																		.																								.				.	.	.	.	.	.													.							.	.	.	.	.	.			.
Template Conservation																		.																												.	.	.	.	.	.													.							.	.	.	.	.	.			.
Template Sequence		Q	L	W	W	L	D	Q	L	H	P	D	V	X	A	N	A	.	T	L	L	P	W	A	Q	Y	W	A	W	F	L	T	G	R	A	V	S	E	V	T	S	L	G	C	H	.	.	.	.	.	.	S	D	L	W	D	P	Q	D	G	D	F	S	.	P	X	A	K	R	L	.	.	.	.	.	.	G	W	.	A	A
Template Known Secondary structure																T		.															S				B						T	T	T	.	.	.	.	.	.		S	S			T	T	T	T				.							.	.	.	.	.	.	T		.	G	G
Template Predicted Secondary structure																		.																												.	.	.	.	.	.													.							.	.	.	.	.	.			.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.							.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190							.	.		.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.						.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																																	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.
Query Sequence		L	F	T	D	T	W	T	A	D	I	P	V	G	T	L	C	P	E	W	A	Q	R	L	G	L	P	E	S	V	V	I	S	G	G	A	F	D	C	H	M	G	A	V	G	A	G	A	.	.	.	.	.	Q	P	N	A	L	V	K	V	I	G	T	S	T	C	D	I	L	I	A	D	K	Q	S	V	G	E	R	A
Query Conservation																																																	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.
Template Conservation
Template Sequence		R	F	A	P	I	V	R	A	G	D	T	V	G	A	L	L	P	A	I	A	E	R	T	G	L	S	P	D	V	Q	V	L	A	G	L	H	D	S	N	A	A	L	L	A	A	R	G	F	A	E	I	A	D	N	E	A	T	V	L	S	T	G	T	W	F	I	A	X	R	L	P	A	T	P	V	D	T	A	T	L
Template Known Secondary structure		G	B			B			T	T	S														T			T	T																		T	T	S	T	T	T	T	T	S	S							S	S	S								S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	G	I	C	G	Q	V	D	G	S	V	V	P	G	F	I	G	L	E	A	G	Q	S	A	F	G	D	I	Y	A	W	F	G	R	V	L	G	W	P	L	E	Q	L	A	A	Q	H	P	E	L	K	T	Q	I	N	A	S	Q	K	Q	L	L	P	A	L	T	E	A	W	A	K	N	P	S	L	D	H	L	P
Query Conservation
Alig confidence					.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	E	A	.	.	R	D	C	L	V	N	V	D	V	H	G	R	P	V	P	S	A	R	F	X	G	G	R	E	I	E	T	L	I	E	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	R	V	D	I	K	P	D	Q	P	A	L	L	A	A	V	P	E	V	L	R	H	G	R
Template Known Secondary structure			G	G	.	.	G	T							T	T	S																				S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G		T	T		G	G	G														T	T
Template Predicted Secondary structure					.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		275	.	.			.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.																			310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	L	D	W	F	N	G	R	R	T	P	N	A	N	Q	R	L	K	G	V	I	T	D	L	N	L	A	T	D	A	P	L	L	F	G	G	L	I	A	A	T	A	F	G	A	R	A	I	M	E	C	F	T	D	Q	G	I	A	V	N	N	V	M	A	L	G	G	I	A	R	K	N	Q	V	I	M	Q	A	C
Query Conservation
Alig confidence																	.	.																												.	.	.	.	.	.																				.
Template Conservation																	.	.																												.	.	.	.	.	.																				.
Template Sequence		X	I	L	P	T	L	X	R	G	F	G	P	Y	P	H	.	.	G	R	F	A	W	I	N	R	P	E	D	W	F	E	R	R	A	A	A	C	L	Y	A	A	L	V	A	.	.	.	.	.	.	D	T	A	L	D	L	I	G	S	T	G	R	I	L	V	E	G	R	F	.	A	E	A	D	V	F	V	R	A	L
Template Known Secondary structure					S		S	S	T	T	S	S	S		T	T	.	.							S			S	S																	.	.	.	.	.	.							T	T			S						S	G	G	.	G	G
Template Predicted Secondary structure																	.	.																												.	.	.	.	.	.																				.
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.			350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.							.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.		.	.	.	.	400	.	.	.	.	.
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure
Query SS confidence
Query Sequence		C	D	V	L	N	R	P	L	Q	I	V	A	S	D	Q	C	C	A	L	G	A	A	I	F	A	A	V	A	A	K	V	H	A	D	I	P	S	A	Q	Q	K	M	A	S	A	V	E	K	T	L	Q	P	C	S	E	Q	A	Q	R	F	E	Q	L	Y	R	R	Y	Q
Query Conservation
Alig confidence						.	.																																.	.	.	.	.
Template Conservation						.	.																																.	.	.	.	.
Template Sequence		A	S	L	R	.	.	P	D	C	A	V	Y	T	A	N	A	H	S	F	G	A	L	R	L	I	D	P	G	L	R	P	Q	G	E	L	V	R	.	.	.	.	.	I	E	P	L	D	T	G	W	A	D	L	D	T	Y	R	N	R	W	Q	A	E	V	E	A	A	K
Template Known Secondary structure						.	.	S	S	S						S				G	G	G						T	T				S	S					.	.	.	.	.
Template Predicted Secondary structure						.	.																																.	.	.	.	.
Template SS confidence
		406	.	.	.			410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440						.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.