Job Description P08204 Confidence 68.54% Date Thu Jan 5 11:00:58 GMT 2012 Rank 157 Aligned Residues 192 % Identity 14% Template c3dwlB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:actin-related protein 3; PDBTitle: crystal structure of fission yeast arp2/3 complex lacking the arp22 subunit Resolution 3.78 Å

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		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.								.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.
Query Sequence		S	V	V	I	S	G	G	A	F	D	C	H	M	G	A	V	G	A	G	A	Q	P	.	.	.	.	.	.	.	N	A	L	V	K	V	I	G	T	S	T	C	D	I	L	I	A	D	K	Q	S	V	G	E	R	A	V	K	G	I	C	G	Q	V	D	G	S	V	V	P	G	F	I	G	L	E	A	G	Q	S	A
Query Conservation																								.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	C	A	G	L	Y	I	A	V	Q	A	V	L	A	L	A	A	S	W	T	S	S	K	V	T	D	R	S	L	T	G	T	V	V	D	S	G	D	G	V	T	H	I	I	P	V	A	E	G	Y	V	I	G	S	S	I	K	T	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L
Template Known Secondary structure				S														G	G	G	G	S	T	T	T		S											S	S	S									T	T				G	G	G					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.																				210	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	D	I	Y	A	W	F	G	R	V	L	G	W	P	L	E	Q	L	A	A	Q	H	P	E	L	K	T	Q	I	N	A	S	Q	K	Q	L	L	P	A	L	T	E	A	W	A	K	N	P	S	L	D	H	L	P	V	V	L	D	W	F	N	G	R	R	T	P	N	A	N	Q	R	L	K	G	V	I	T	D	L
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.																																							.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.																																							.	.	.
Template Sequence		A	G	R	D	V	T	Y	F	V	Q	S	L	.	.	.	.	.	.	.	.	.	L	R	L	K	T	A	E	R	I	K	E	E	C	C	Y	V	C	P	D	I	V	K	E	F	S	R	F	D	R	L	K	Y	A	S	I	D	V	G	.	.	.	F	E	R	F	L	A	P	E	I	F	F	N	P	E	I	A	S	S
Template Known Secondary structure													T	.	.	.	.	.	.	.	.	.	T																	S									T	T				B				B			.	.	.	T					S	G	G	G	G	T		G	G	G	T		S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.																																							.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.										.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.				.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.										.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.											.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.											.
Query Sequence		N	L	A	T	D	A	P	L	L	F	G	G	L	I	A	A	T	A	F	G	A	R	A	I	M	E	C	F	T	D	Q	G	I	A	V	N	N	V	M	A	L	G	G	I	A	R	K	N	Q	V	I	M	Q	A	C	C	D	V	L	N	.	.	.	.	.	.	.	.	.	R	P	L	Q	I	V	A	S	D	Q	.
Query Conservation																																																														.	.	.	.	.	.	.	.	.											.
Alig confidence																											.	.	.	.	.	.	.	.	.											.																.	.	.	.	.	.	.	.	.											.
Template Conservation																											.	.	.	.	.	.	.	.	.											.
Template Sequence		D	F	L	T	P	L	P	E	L	V	D	N	V	V	Q	S	S	P	I	D	V	R	K	G	L	.	.	.	.	.	.	.	.	.	Y	K	N	I	V	L	S	G	G	S	.	T	L	F	K	N	F	G	N	R	L	Q	R	D	L	K	R	I	V	D	E	R	G	V	D	V	N	V	I	S	H	K	R	Q	R	N
Template Known Secondary structure		S			S												T	S									.	.	.	.	.	.	.	.	.								S	G	G	.	G		S	T	T	T	T												T	T											T	T		T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.											.
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.										.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
		488	.	490	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	C	A	L	G	A	A	I	F	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	W	F	G	G	S	L	L	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions