Job Description P08204 Confidence 100.00% Date Thu Jan 5 11:00:58 GMT 2012 Rank 8 Aligned Residues 488 % Identity 19% Template c2zf5O_ PDB info PDB header:transferase Chain: O: PDB Molecule:glycerol kinase; PDBTitle: crystal structure of highly thermostable glycerol kinase from a2 hyperthermophilic archaeon Resolution 2.40 Å

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		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		M	A	.	I	A	I	G	L	D	F	G	S	D	S	V	R	A	L	A	V	D	C	A	T	G	E	E	I	A	T	S	V	E	W	Y	P	R	W	Q	K	G	Q	F	C	D	A	P	N	N	Q	F	R	H	H	P	R	D	Y	I	E	S	M	E	A	A	L	K	T	V	L	A	E	L	S	V	E	Q	R	A	A
Query Conservation				.
Alig confidence				.																			.															.	.	.	.	.	.																																					.
Template Conservation																							.															.	.	.	.	.	.																																					.
Template Sequence		M	E	K	F	V	L	S	L	D	E	G	T	T	S	A	R	A	I	I	F	D	.	R	E	S	N	I	H	G	I	G	Q	Y	E	F	P	.	.	.	.	.	.	Q	H	Y	P	R	P	G	W	V	E	H	N	P	E	E	I	W	D	A	Q	L	R	A	I	K	D	A	I	Q	S	A	R	I	E	P	N	.	Q
Template Known Secondary structure													S	S									.	T	T													.	.	.	.	.	.		B			S	T	T																									T			G	G	.	G
Template Predicted Secondary structure																							.															.	.	.	.	.	.																																					.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.							.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	G	I	G	V	D	S	T	G	S	T	P	A	P	I	D	A	D	G	N	V	L	A	L	R	P	E	F	A	E	N	P	N	A	M	F	V	L	W	K	D	H	T	A	V	E	E	A	E	E	I	T	R	L	C	H	A	P	G	N	V	D	Y	S	R	Y	I	G	G	I	Y	S	S	E	W	F	W	A	K
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Sequence		I	A	A	I	G	V	T	N	Q	R	E	T	T	L	V	W	D	K	D	G	K	P	L	.	.	.	.	.	.	.	.	.	.	.	Y	N	A	I	V	W	Q	C	R	R	T	A	E	M	V	E	E	I	K	R	E	Y	.	.	.	.	G	T	M	I	K	E	K	T	G	L	V	P	D	A	Y	F	S	A	S	K
Template Known Secondary structure											S	S							T	T			B	S	.	.	.	.	.	.	.	.	.	.	.	S					T	T			T	T												.	.	.	.									S	S				T	T	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.												.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.					.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.					.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		I	L	H	V	T	R	Q	D	S	A	V	A	Q	S	A	A	S	.	.	.	.	W	I	E	L	C	D	W	V	P	A	L	L	S	G	T	T	R	P	Q	D	I	R	R	G	R	C	S	A	G	H	K	S	L	W	H	E	S	W	G	G	L	P	P	A	S	F	F	D	E	L	D	P	I	L	N	R	H	L	P
Query Conservation																			.	.	.	.
Alig confidence																			.	.	.	.																										.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.																				.	.	.	.	.	.
Template Sequence		L	K	W	L	L	D	N	V	P	G	L	R	E	K	A	E	K	G	E	V	M	F	G	T	V	D	T	F	L	I	Y	R	L	T	G	E	H	V	T	D	Y	S	N	A	S	R	.	.	.	.	.	.	T	M	L	F	N	I	K	K	L	D	W	D	D	E	L	L	E	L	F	.	.	.	.	.	.	D	I	P
Template Known Secondary structure									S	T	T							T	T																	S										T	T	.	.	.	.	.	.	S	S	S			T	T	T	T										T	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																.	.	.	.	.	.																				.	.	.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.							.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.							.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		S	P	L	F	T	D	T	W	T	A	D	I	P	V	G	T	L	C	P	E	W	A	Q	R	L	G	L	P	E	S	V	V	I	S	G	G	A	F	D	C	H	M	G	A	V	G	A	G	A	.	Q	P	N	A	L	V	K	V	I	G	T	S	T	C	D	I	L	I	A	D	K	Q	S	V	G	E	R	A	V	K
Query Conservation																																																			.
Alig confidence																						.	.	.	.	.																									.
Template Conservation																						.	.	.	.	.
Template Sequence		E	S	V	L	P	E	V	R	E	S	S	E	V	Y	G	Y	T	K	K	E	.	.	.	.	.	L	L	G	A	E	I	P	V	S	G	D	A	G	D	Q	Q	A	A	L	F	G	Q	A	A	F	E	A	G	M	V	K	A	T	Y	G	T	G	S	F	I	L	V	N	T	D	K	M	V	L	Y	S	D	N	L	L
Template Known Secondary structure		G	G	G							S											.	.	.	.	.			S	S																		T	T			S	T	T							S	S	S									T						T	T	S
Template Predicted Secondary structure																						.	.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.						.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	C	G	Q	V	D	G	S	V	V	P	G	F	I	G	L	E	A	G	Q	S	A	F	G	D	I	Y	A	W	F	G	R	V	L	G	W	P	L	E	Q	L	A	A	Q	H	P	E	L	K	T	Q	I	N	A	S	Q	K	Q	L	L	P	A	L	T	E	A	W	A	K	N	P	S	L	D	H	L	P	V	V
Query Conservation
Alig confidence											.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	T	I	A	W	G	L	N	G	.	.	R	V	S	Y	A	L	E	G	S	I	F	V	T	G	A	A	V	Q	W	L	R	D	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	I	K	H	A	S	E	T	E	E	L	A	T	K	L	E	S	N	E	G	V	Y	F
Template Known Secondary structure									T	T	.	.											S		S										T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S		G	G	G						T	T	S	S	S		T	T
Template Predicted Secondary structure											.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.			290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.																						.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	W	F	N	G	R	R	T	P	N	A	N	Q	R	L	K	G	V	I	T	D	L	N	L	A	T	D	A	P	L	L	F	G	G	L	I	A	A	T	A	F	G	A	R	A	I	M	E	C	F	T	D	Q	G	I	A	V	N	N	V	M	A	L	G	G	I	A	R	K	N	Q	V	I	M	Q	A	C	C	D
Query Conservation
Alig confidence																																																							.															.
Template Conservation																																																							.															.
Template Sequence		V	P	A	F	V	G	L	G	A	P	Y	W	D	Q	F	A	R	G	I	I	I	G	I	T	R	G	T	G	R	E	H	L	A	R	A	T	L	E	A	I	A	Y	L	T	R	D	V	V	D	E	M	E	K	.	L	V	Q	I	K	E	L	R	V	D	G	G	A	T	.	A	N	D	F	L	M	Q	F	Q	A	D
Template Known Secondary structure					T	T		B		T	T	T		B	T	T										T	T																										T	T	.	T	S									S	G	G	G	.	G
Template Predicted Secondary structure																																																							.															.
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390		.	.	.	.	.	.	.	.	.	400	.	.	.	.		.	.	.	.	.	410	.	.	.	.	.
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	N	R	P	L	Q	I	V	A	S	D	Q	C	C	A	L	G	A	A	I	F	A	A	V	A	A	K	V	H	A	D	I	P	S	A	Q	Q	K	M	A	S	A	V	E	K	T	L	Q	P	C	S	E	Q	A	Q	R	F	E	Q	L	Y	R	R	Y	Q	Q	W	A	M	S	A	E	Q	H	Y	L	P	T	S
Query Conservation
Alig confidence																																								.				.											.
Template Conservation																																								.				.											.
Template Sequence		I	L	N	R	K	V	I	R	P	V	V	K	E	T	T	A	L	G	A	A	Y	L	A	G	L	A	V	D	Y	W	A	D	T	R	E	I	A	E	.	L	W	K	.	A	E	R	I	F	E	P	K	M	D	.	E	K	T	R	E	R	L	Y	K	G	W	K	E	A	V	K	R	A	M	G	W	A	K	V	V	D
Template Known Secondary structure				T	S						S		S															T	T	S	S								T	.	T			.											.																	T	T	T	T	G	G	G	T
Template Predicted Secondary structure																																								.				.											.
Template SS confidence
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.		.	.	.		.	.	.	460	.	.	.	.	.	.		.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
		555	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		493	.