Job Description P08204 Confidence 21.34% Date Thu Jan 5 11:00:58 GMT 2012 Rank 215 Aligned Residues 64 % Identity 13% Template c2gyc2_ PDB info PDB header:ribosome Chain: 2: PDB Molecule:50s ribosomal protein l1; PDBTitle: structure of the 50s subunit of a secm-stalled e. coli2 ribosome complex obtained by fitting atomic models for rna3 and protein components into cryo-em map emd-1143 Resolution 15.00 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																													.
Query SS confidence																																													.
Query Sequence		Y	P	R	W	Q	K	G	Q	F	C	D	A	P	N	N	Q	F	R	H	H	P	R	D	Y	I	E	S	M	E	A	A	L	K	T	V	L	A	E	L	S	V	E	Q	.	R	A	A	V	V	G	I	G	V	D	S	T	G	S	T	P	A	P	I	D	A
Query Conservation																																													.
Alig confidence																																													.
Template Conservation
Template Sequence		R	Y	R	N	D	K	N	G	I	I	H	T	T	I	G	K	V	D	F	D	A	D	K	L	K	E	N	L	E	A	L	L	V	A	L	K	K	A	K	P	T	Q	A	K	G	V	Y	I	K	K	V	S	I	S	T	T	M	G	A	G	V	A	V	D	Q
Template Known Secondary structure							S	S	S		B							T	T	S																		T	T			S	S			S		S									S	S	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions