Return to main results Retrieve Phyre Job Id

Job DescriptionQ1PI72
Confidence100.00%DateThu Jan 5 12:33:31 GMT 2012
Rank11Aligned Residues188
% Identity27%Templated1vlca_
SCOP infoIsocitrate/Isopropylmalate dehydrogenase-like Isocitrate/Isopropylmalate dehydrogenase-like Dimeric isocitrate & isopropylmalate dehydrogenases
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70....
Predicted Secondary structure 































......
Query SS confidence 









































































. . . . . .
Query Sequence  IGVDVTPAMLKVVDAAVEKAYKGERKISWMEIYTGEKSTQVYGQDVWLPAETLDLIREYRVAIKGPLTTPVGGG. . . . . .
Query Conservation 




  
   

 

           
      
       
    

  


     

 
 


  
    ......
Alig confidence 


















...






















..


























......
Template Conservation 




      

 
    ...     
      
       
  ..

  
       
  
 

 
 
          
Template Sequence  IGPEVVREALKVLEVVEKK. . . TGKTFEKVFGHIGGDAIDRFGEP. . LPEETKKICLEADAIFLGSVGGPKWDDLPPEKR
Template Known Secondary structure  ...




TSSS..S
SS


GGGTTS
STTS
Template Predicted Secondary structure 

...








..


















Template SS confidence 















































































   11........20......... 30.........40.........50.. .......60.........70.........80.....
 
   75....80.........90.........100. ....... .110.........120.........130.........140........
Predicted Secondary structure  .












..






...

























Query SS confidence  .


























. .






. . .







































Query Sequence  . IRSLNVALRQELDLYICLRPVRYYQGT. . PSPVKHP. . . ELTDMVIFRENSEDIYAGIEWKADSADAEKVIKFLREEMG
Query Conservation  .  
  
 


 








 
  

 ..       ...  











 
 
                     
Alig confidence  .


























..






...



















....................
Template Conservation     
    

  








     
     
         

 








 
 
  ....................
Template Sequence  PEIGGLLALRKMLNLYANIRPIKVYRSLVHVSPLKEKVIGSGVDLVTVRELSYGVYYGQP. . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  TTT



GGGGGGSSS
TT


SSGGGT....................
Template Predicted Secondary structure 




































....................
Template SS confidence 















































































   86...90.........100.........110.........120.........130.........140.....
 
   149150.........160.........170.........180.........190.........200.........210.........
Predicted Secondary structure 














Query SS confidence 






































































Query Sequence  VKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAIANDRDSVTLVHKGNIMKFTEGAFKDWGYQLAREEFGG
Query Conservation            
      

   


 
 

  
  
 
  

 
 





 
 


  
  


 

   
Alig confidence  ...
































.













.












.




Template Conservation  ...       
      

    

 
 

  
   . 
 

 
 




 .




     


. 


 
Template Sequence  . . . RGLDEEKGFDTMIYDRKTVERIARTAFEIAKNR. RKKVTSVDKANVLY. SSMLWRKVVNEVA. REYPD
Template Known Secondary structure  ...
SS




TT.TS
TTT
..TT
TT
Template Predicted Secondary structure  ...







.

..


Template SS confidence 






































































   146...150.........160.........170........ .180.........190.. .......200..... ....210
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions