Job Description Q1PI72 Confidence 100.00% Date Thu Jan 5 12:33:31 GMT 2012 Rank 24 Aligned Residues 212 % Identity 17% Template c3us8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:isocitrate dehydrogenase [nadp]; PDBTitle: crystal structure of an isocitrate dehydrogenase from sinorhizobium2 meliloti 1021 Resolution 2.25 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70										.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.
Query Sequence		G	V	D	V	T	P	A	M	L	K	V	V	D	A	A	V	E	K	A	Y	K	G	E	R	K	I	S	W	M	E	I	Y	T	G	E	K	S	T	Q	V	Y	G	Q	D	V	W	L	P	A	E	T	L	D	L	I	R	E	Y	R	V	A	I	K	G	P	L	T	T	P	.	.	.	.	.	.	.	.	.	V	G
Query Conservation																																																																							.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.																								.	.																								.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.																								.	.
Template Sequence		G	D	E	X	T	R	I	I	W	Q	F	I	K	D	K	L	I	H	.	.	.	P	Y	L	D	L	D	L	E	Y	Y	D	L	G	V	E	N	R	D	A	T	D	D	Q	.	.	V	T	I	D	A	A	N	A	I	K	K	H	G	V	G	V	K	C	A	T	I	T	P	D	E	G	R	V	E	E	F	K	L	K
Template Known Secondary structure																		T	T	.	.	.	T	T																		T	T	T		.	.													S																			T		S
Template Predicted Secondary structure																				.	.	.																								.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	I	R	S	L	N	V	A	L	R	Q	E	L	D	L	Y	I	C	L	R	P	V	R	Y	Y	Q	G	T	P	S	P	V	K	H	P	E	L	T	D	M	V	I	F	R	E	N	S	E	D	I	Y	A	G	I	E	W	K	A	D	S	A	D	A	E	K	V	I	K	F	L	R	E	E	M	G	V	K	K	I
Query Conservation
Alig confidence																										.														.
Template Conservation																										.														.
Template Sequence		K	X	W	K	S	P	N	G	T	I	R	N	I	L	G	G	V	I	F	R	E	P	I	I	.	C	K	N	V	P	R	L	V	P	G	W	T	K	.	P	I	I	V	G	R	H	A	F	G	D	Q	Y	R	A	T	D	F	K	F	P	G	K	G	K	L	S	I	K	F	V	G	E	D	G	Q	T	I	E	H	D
Template Known Secondary structure		S															S									.		T	T	S			S	S	T	T			S	.									S	S	G	G	G	G								S	S										T	T	S
Template Predicted Secondary structure																										.														.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
				153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	R	F	P	E	H	C	G	I	G	I	K	P	C	S	E	E	G	T	K	R	L	V	R	A	A	I	E	Y	A	I	A	N	D	R	D	S	V	T	L	V	H	K	G	N	I	M	K	F	T	E	G	A	F	K	D	W	G	Y	Q	L	A	R	E	E	F	G	G	E	L
Query Conservation		.	.
Alig confidence		.	.																																			.
Template Conservation																																						.
Template Sequence		V	Y	D	A	P	G	A	G	V	A	L	A	X	Y	N	L	D	E	S	I	T	E	F	A	R	A	S	F	N	Y	G	L	Q	R	K	V	.	P	V	Y	L	S	T	K	N	T	I	L	K	A	Y	D	G	R	F	K	D	I	F	Q	K	V	F	D	E	E	F	A	A	Q	F
Template Known Secondary structure						S	S																													T		.								T	T	T	S	T	T																	T
Template Predicted Secondary structure																																						.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions