Job Description Q1PI72 Confidence 100.00% Date Thu Jan 5 12:33:31 GMT 2012 Rank 15 Aligned Residues 193 % Identity 22% Template c3r8wC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:3-isopropylmalate dehydrogenase 2, chloroplastic; PDBTitle: structure of 3-isopropylmalate dehydrogenase isoform 2 from2 arabidopsis thaliana at 2.2 angstrom resolution Resolution 2.25 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		I	G	V	D	V	T	P	A	M	L	K	V	V	D	A	A	V	E	K	A	Y	K	G	E	R	K	I	S	W	M	E	I	Y	T	G	E	K	S	T	Q	V	Y	G	Q	D	V	W	L	P	A	E	T	L	D	L	I	R	E	Y	R	V	A	I	K	G	P	L	T	T	P	V	G	G	G	I	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																					.	.	.																								.	.																													.	.	.	.	.
Template Conservation																					.	.	.																								.	.
Template Sequence		I	G	P	E	V	V	S	I	A	K	N	V	L	Q	Q	A	G	S	L	.	.	.	E	G	V	E	F	N	F	R	E	M	P	I	G	G	A	A	L	D	L	V	G	V	P	.	.	L	P	E	E	T	I	S	A	A	K	E	S	D	A	V	L	L	G	A	I	G	G	Y	K	W	D	N	N	E	K	H	L	R
Template Known Secondary structure		T																			.	.	.	T	T																			S	S	S	.	.	S											S	S														T	S		G	G	G	S
Template Predicted Secondary structure																					.	.	.																								.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
			76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure		.																											.	.								.	.
Query SS confidence		.																											.	.								.	.
Query Sequence		.	R	S	L	N	V	A	L	R	Q	E	L	D	L	Y	I	C	L	R	P	V	R	Y	Y	Q	G	T	.	.	P	S	P	V	K	H	P	.	.	E	L	T	D	M	V	I	F	R	E	N	S	E	D	I	Y	A	G	I	E	W	K	A	D	S	A	D	A	E	K	V	I	K	F	L	R	E	E	M	G	V	K
Query Conservation		.																											.	.								.	.
Alig confidence		.																											.	.								.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	E	K	G	L	L	Q	I	R	A	A	L	K	V	F	A	N	L	R	P	A	T	V	L	P	Q	L	V	D	A	S	T	L	K	R	E	V	A	E	G	V	D	L	M	V	V	R	E	L	T	G	G	I	Y	F	G	E	P	R	G	I	K	T	N	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														T												G	G	G	G	G	G	S	S	S						T	T										S		S	T	T	T		S	S							G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	R	F	P	E	H	C	G	I	G	I	K	P	C	S	E	E	G	T	K	R	L	V	R	A	A	I	E	Y	A	I	A	N	D	R	D	S	V	T	L	V	H	K	G	N	I	M	K	F	T	E	G	A	F	K	D	W	G	Y	Q	L	A	R	E	E	F	G	G
Query Conservation
Alig confidence		.	.	.	.																															.																		.											.
Template Conservation		.	.	.	.																															.																		.											.
Template Sequence		.	.	.	.	G	E	E	V	G	F	N	T	E	V	Y	A	A	H	E	I	D	R	I	A	R	V	A	F	E	T	A	R	K	R	.	R	G	K	L	C	S	V	D	K	A	N	V	L	E	A	S	I	.	L	W	R	K	R	V	T	A	L	A	.	S	E	Y	P	D
Template Known Secondary structure		.	.	.	.	G																												T	T	.	T	S								T	T	T						.										G	.	G	G	S	T	T
Template Predicted Secondary structure		.	.	.	.																															.																		.											.
Template SS confidence
						156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.		.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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