Job Description Q1PI72 Confidence 100.00% Date Thu Jan 5 12:33:31 GMT 2012 Rank 21 Aligned Residues 209 % Identity 15% Template c2uxqB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:isocitrate dehydrogenase native; PDBTitle: isocitrate dehydrogenase from the psychrophilic bacterium2 desulfotalea psychrophila: biochemical properties and3 crystal structure analysis Resolution 1.75 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70										.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.
Query Sequence		I	G	V	D	V	T	P	A	M	L	K	V	V	D	A	A	V	E	K	A	Y	K	G	E	R	K	I	S	W	M	E	I	Y	T	G	E	K	S	T	Q	V	Y	G	Q	D	V	W	L	P	A	E	T	L	D	L	I	R	E	Y	R	V	A	I	K	G	P	L	T	T	P	.	.	.	.	.	.	.	.	.	V
Query Conservation																																																																								.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.																							.	.																								.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.																							.	.
Template Sequence		M	T	R	V	L	W	P	L	I	K	D	K	L	L	L	P	.	.	.	.	.	.	.	F	I	D	L	Q	T	E	Y	Y	D	L	G	I	E	E	R	D	R	T	N	D	Q	.	.	I	T	I	D	A	A	E	A	I	K	K	Y	G	V	G	V	K	N	A	T	I	T	P	N	Q	D	R	V	E	E	Y	G	L
Template Known Secondary structure															T	T	T	.	.	.	.	.	.	.	T	B										S							T	T	T		.	.													S																			T
Template Predicted Secondary structure																		.	.	.	.	.	.	.																							.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.								.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.
Predicted Secondary structure																																																																														.	.
Query SS confidence																																																																														.	.
Query Sequence		G	G	G	I	R	S	L	N	V	A	L	R	Q	E	L	D	L	Y	I	C	L	R	P	V	R	Y	Y	Q	G	T	P	S	P	V	K	H	P	E	L	T	D	M	V	I	F	R	E	N	S	E	D	I	Y	A	G	I	E	W	K	A	D	S	A	D	A	E	K	V	I	K	F	L	R	E	E	M	.	.	G	V
Query Conservation																																																																														.	.
Alig confidence																											.												.																																							.	.
Template Conservation																											.												.
Template Sequence		K	E	Q	W	K	S	P	N	A	T	V	R	A	M	L	D	G	T	V	F	R	K	P	I	M	.	V	K	N	I	K	P	S	V	R	S	W	.	Q	K	P	I	V	V	G	R	H	A	Y	G	D	F	Y	K	N	A	E	I	F	A	E	A	G	G	K	L	E	I	V	V	T	D	K	N	G	K	E	T	R	Q
Template Known Secondary structure		S	S																								.		T	T	B			S	S	T	T		.		S									S		G	G	G	G							T	T											T	T
Template Predicted Secondary structure																											.												.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	I	R	F	P	E	H	C	G	I	G	I	K	P	C	S	E	E	G	T	K	R	L	V	R	A	A	I	E	Y	A	I	A	N	D	R	D	S	V	T	L	V	H	K	G	N	I	M	K	F	T	E	G	A	F	K	D	W	G	Y	Q	L	A	R	E	E	F	G	G	E	L
Query Conservation
Alig confidence																																							.
Template Conservation																																							.
Template Sequence		T	I	M	E	V	D	E	P	A	I	V	Q	G	I	H	N	T	V	A	S	I	G	H	F	A	R	A	C	F	E	Y	S	L	D	Q	K	I	.	D	C	W	F	A	T	K	D	T	I	S	K	Q	Y	D	Q	R	F	K	I	I	F	E	E	I	F	A	Q	E	Y	K	E	K	F
Template Known Secondary structure							S	S																													T		.								T	T	T		T	T																	T
Template Predicted Secondary structure																																							.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions