Job Description Q1PI72 Confidence 100.00% Date Thu Jan 5 12:33:31 GMT 2012 Rank 23 Aligned Residues 209 % Identity 15% Template c2qfyE_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:isocitrate dehydrogenase [nadp]; PDBTitle: crystal structure of saccharomyces cerevesiae mitochondrial nadp(+)-2 dependent isocitrate dehydrogenase in complex with a-ketoglutarate Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70										.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.
Query Sequence		I	G	V	D	V	T	P	A	M	L	K	V	V	D	A	A	V	E	K	A	Y	K	G	E	R	K	I	S	W	M	E	I	Y	T	G	E	K	S	T	Q	V	Y	G	Q	D	V	W	L	P	A	E	T	L	D	L	I	R	E	Y	R	V	A	I	K	G	P	L	T	T	P	.	.	.	.	.	.	.	.	.	V
Query Conservation																																																																								.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.																							.	.																								.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.																							.	.
Template Sequence		M	T	R	I	I	W	D	K	I	K	K	K	L	I	L	P	.	.	.	.	.	.	.	Y	L	D	V	D	L	K	Y	Y	D	L	S	V	E	S	R	D	A	T	S	D	K	.	.	I	T	Q	D	A	A	E	A	I	K	K	Y	G	V	G	I	K	C	A	T	I	T	P	D	E	A	R	V	K	E	F	N	L
Template Known Secondary structure														T	T	T	T	.	.	.	.	.	.	.	T											S							T	T	T		.	.													S																		T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.																							.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.								.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	G	I	R	S	L	N	V	A	L	R	Q	E	L	D	L	Y	I	C	L	R	P	V	R	Y	Y	Q	G	T	P	S	P	V	K	H	P	E	L	T	D	M	V	I	F	R	E	N	S	E	D	I	Y	A	G	I	E	W	K	A	D	S	A	D	A	E	K	V	I	K	F	L	R	E	E	M	G	V	K	K
Query Conservation
Alig confidence																											.												.
Template Conservation																											.												.
Template Sequence		H	K	M	W	K	S	P	N	G	T	I	R	N	I	L	G	G	T	V	F	R	E	P	I	V	.	I	P	R	I	P	R	L	V	P	R	W	.	E	K	P	I	I	I	G	R	H	A	H	G	D	Q	Y	K	A	T	D	T	L	I	P	G	P	G	S	L	E	L	V	Y	K	P	S	D	P	T	T	A	Q	P
Template Known Secondary structure		S	S															S									.		T	T	S			S	S	T	T		.		S									S	S	G	G	G	S								S	S										S		T	T	T	S
Template Predicted Secondary structure																											.												.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		152						.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure			.	.	.	.	.
Query SS confidence			.	.	.	.	.
Query Sequence		I	.	.	.	.	.	R	F	P	E	H	C	G	I	G	I	K	P	C	S	E	E	G	T	K	R	L	V	R	A	A	I	E	Y	A	I	A	N	D	R	D	S	V	T	L	V	H	K	G	N	I	M	K	F	T	E	G	A	F	K	D	W	G	Y	Q	L	A	R	E	E	F	G	G	E	L
Query Conservation			.	.	.	.	.
Alig confidence			.	.	.	.	.																																	.
Template Conservation																																								.
Template Sequence		Q	T	L	K	V	Y	D	Y	K	G	S	G	V	A	M	A	M	Y	N	T	D	E	S	I	E	G	F	A	H	S	S	F	K	L	A	I	D	K	.	K	L	N	L	F	L	S	T	K	N	T	I	L	K	K	Y	D	G	R	F	K	D	I	F	Q	E	V	Y	E	A	Q	Y	K	S	K	F
Template Known Secondary structure										S	S																												T	.	T									T	T	T	S	T	T																	T
Template Predicted Secondary structure																																								.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions