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Job DescriptionP29745
Confidence99.89%DateThu Jan 5 11:45:41 GMT 2012
Rank52Aligned Residues244
% Identity17%Templated1xmba1
SCOP infoPhosphorylase/hydrolase-like Zn-dependent exopeptidases Bacterial dinuclear zinc exopeptidases
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  DKLLERFLNYVSLDTQSKAGVRQVPSTEGQWKLLHLLKEQLEEMGLINVTLSEKGTLMATLPANVPGDIPAIGFISHVDT
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Template Sequence  DWMVKIRRKIHENPELGY. . . . . . . . . . EELETSKLIRSELELIGIKYRYPVAITGVIGYIGT. . . GEPPFVALRADMDA
Template Known Secondary structure  S


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   4950.........60...... ...70.........80.........90.........100. ........110.....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  SPDCSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGIAEIMTALAVLQQKKIP
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Template Sequence  LPIQE. . . . . . . . . . . . . . . . . . . . . . . . . . . . GVEWEHKSKI. AGKMHACG. . . . . . . HDGHVTMLLGAAKILHEHRHH
Template Known Secondary structure  BS


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STT

SS.TT
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   116...120 .........130 ........ .140.........150.........
 
   162.......170.........180.........190 .........200.........210.........220.........230......
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Query Sequence  . HGDIRVAFTPDEEVGKGAKHFDVDAFDAR. . . . WAYTVDGGGVGELEFENFNAASVNIKIVGNNVHPGTAKGVMVNALS
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Template Sequence  LQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGS. . . . . . . . . . . . . . . . . . . . . . . . . .
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SS

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   160.........170.........180.........190.........200.........210...
 
   237..240.........250.........260.........270.........280.........290.........300.........310......
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Query Sequence  LAARIHAEVPADESPEMTEGYEGFYHLASMKGTVERADMHYIIRDFDRKQFEARKRKMMEIAKKVGKGLHPDCYIELVIE
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   317..320.........330.........340... ......350 .........360.........370...... ...380......
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Query Sequence  DSYYNMREKVVEHPHILDIAQQAMRDC. DIEPELK. . PIRGGTDGAQLSFMGLPCPNLFTGGY. . . . . . . NYHGKHEFVT
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Template Sequence  . . . . . . . FLTVNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAET. IPGHFSLLGMQDETNGYASSHSPLYRIN
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GGG







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   214.....220.........230.........240.........250....... ..260.........270.........280.....
 
   387..390.........400........
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Query Sequence  LEGMEKAVQVIVRIAELTAQRK
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Template Sequence  EDVLPYGAAIHASMAVQYLKEK
Template Known Secondary structure  GGG
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   405....410.........420......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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