Job Description P29745 Confidence 100.00% Date Thu Jan 5 11:45:41 GMT 2012 Rank 4 Aligned Residues 358 % Identity 24% Template c3rzaA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:tripeptidase; PDBTitle: crystal structure of a tripeptidase (sav1512) from staphylococcus2 aureus subsp. aureus mu50 at 2.10 a resolution Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.								.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.
Query Sequence		D	K	L	L	E	R	F	L	N	Y	V	S	L	D	T	Q	S	K	A	G	V	R	Q	V	P	S	T	E	G	Q	W	K	L	L	H	L	L	K	E	Q	L	E	E	M	G	L	I	N	V	T	L	S	.	.	.	.	.	.	.	E	K	G	T	L	M	A	T	L	P	A	N	V	P	G	D	I	P	A	I	G
Query Conservation																																																						.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.													.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.																																												.	.
Template Sequence		Q	R	L	L	N	T	F	L	E	L	V	Q	I	D	S	E	T	G	.	.	.	.	.	.	.	.	.	.	N	E	S	T	I	Q	P	I	L	K	E	K	F	I	A	L	G	L	D	V	K	E	D	E	A	A	K	H	P	K	L	G	A	N	N	L	V	C	T	X	N	S	T	.	.	I	E	V	P	K	L	Y
Template Known Secondary structure													T	S			B	T	T	.	.	.	.	.	.	.	.	.	.		T	T	T												T	T							S	G	G	G	S	T	T		S	S											.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.																																												.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.											.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	S	H	V	D	T	S	P	D	C	S	G	K	N	V	N	P	Q	I	V	E	N	Y	R	G	G	D	I	A	L	G	I	G	D	E	V	L	S	P	V	M	F	P	V	L	H	Q	L	L	G	Q	T	L	I	T	T	D	G	K	T	L	L	G	A	D	D	K	A	G	I	A	E	I	M	T	A	L	A	V
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template Sequence		L	T	S	H	X	D	T	V	V	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	N	V	K	P	I	.	.	V	K	D	D	G	Y	I	Y	S	D	G	T	T	I	L	G	A	D	D	K	A	G	L	A	A	X	L	E	V	L	Q	V
Template Known Secondary structure								B		S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S					.	.			T	T	S						S	S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.																														.	.	.	90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																						.																									.
Query SS confidence																						.																									.
Query Sequence		L	Q	Q	K	K	I	P	H	G	D	I	R	V	A	F	T	P	D	E	E	.	V	G	K	G	A	K	H	F	D	V	D	A	F	D	A	R	W	A	Y	T	V	D	G	G	.	G	V	G	E	L	E	F	E	N	F	N	A	A	S	V	N	I	K	I	V	G	N	N	V	H	P	G	T	A	K	G	V	M	V
Query Conservation																						.																									.
Alig confidence																						.																									.																										.
Template Conservation																																																																									.
Template Sequence		I	K	E	Q	Q	I	P	H	G	Q	I	Q	F	V	I	T	V	G	E	E	S	G	L	I	G	A	K	E	L	N	S	E	L	L	D	A	D	F	G	Y	A	I	D	A	S	A	D	V	G	T	T	V	V	G	A	P	T	Q	X	L	I	S	A	K	I	I	G	K	T	A	H	.	A	S	T	P	K	E	G	V
Template Known Secondary structure						T												S		G	G	G	T	S								G	G	G				S								S	S		T	T																			B			B	.	T	T	S	G	G	G	S	B
Template Predicted Secondary structure																																																																									.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		N	A	L	S	L	A	A	R	I	H	A	E	V	P	A	D	E	S	P	E	M	T	E	G	Y	E	G	F	Y	H	L	A	S	.	M	K	G	T	V	E	R	A	D	M	H	Y	I	I	R	D	F	D	R	K	Q	F	E	A	R	K	R	K	M	M	E	I	A	K	K	V	G	K	G	L	H	P	D	C	Y	I
Query Conservation																																			.
Alig confidence																																			.
Template Conservation
Template Sequence		S	A	I	N	I	A	A	K	A	I	S	R	X	K	L	G	Q	V	D	E	I	T	T	A	N	I	G	K	F	H	G	G	S	A	T	N	I	V	A	D	E	V	I	L	E	A	E	A	R	S	H	D	P	E	R	I	K	T	Q	V	K	H	X	T	D	V	F	E	T	T	A	S	E	L	G	G	K	A	E	V
Template Known Secondary structure														S							T	T												S		T	T	B														S	S																						T	T
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	V	I	E	D	S	Y	Y	N	M	R	E	K	V	V	E	H	P	H	I	L	D	I	A	Q	Q	A	M	R	D	C	D	I	E	P	E	L	K	P	I	R	G	G	T	D	G	A	Q	L	S	F	M	G	L	P	C	P	N	L	F	T	G	G	Y	N	Y	H	G	K	H	E	F	V	T	L	E	G	M	E
Query Conservation
Alig confidence								.	.	.	.
Template Conservation								.	.	.	.
Template Sequence		T	V	E	Q	S	Y	.	.	.	.	P	G	F	K	I	N	D	N	E	A	V	V	K	I	A	Q	E	S	A	R	N	L	G	L	S	A	N	T	I	I	S	G	G	G	S	D	G	S	I	I	N	T	F	G	I	P	S	V	I	L	G	V	G	Y	E	K	I	H	T	T	N	E	R	X	P	I	K	S	L	N
Template Known Secondary structure								.	.	.	.							T	T	S													T	T									S	S								G	G	G	T											B	S	T	T	S	T	T
Template Predicted Secondary structure								.	.	.	.
Template SS confidence
		284	.	.	.	.	.					290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	V	Q	V	I	V	R	I	A	E	L	T	A	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	A	S	Q	V	L	E	I	I	K	I	V	A	R	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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