Job Description P29745 Confidence 99.31% Date Thu Jan 5 11:45:41 GMT 2012 Rank 66 Aligned Residues 232 % Identity 20% Template c3pb6X_ PDB info PDB header:transferase Chain: X: PDB Molecule:glutaminyl-peptide cyclotransferase-like protein; PDBTitle: crystal structure of the catalytic domain of human golgi-resident2 glutaminyl cyclase at ph 6.5 Resolution 1.05 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.											.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																									.	.										.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.										.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Q	V	P	S	T	E	G	Q	W	K	L	L	H	L	L	K	E	Q	L	E	E	M	.	.	G	L	I	N	V	T	L	S	E	.	.	.	.	.	.	.	.	.	.	K	G	T	L	M	A	T	L	P	A	N	V	P	G	D	I	P	A	I	G	F	I	S	H	V	D	T	S	P	D	C	S	G	K	N	V
Query Conservation																									.	.										.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.										.	.	.	.	.	.	.	.	.	.												.	.	.
Template Conservation																																																									.	.	.
Template Sequence		V	R	T	P	G	S	P	G	N	L	Q	V	R	K	F	L	E	A	T	L	R	S	L	T	A	G	W	H	V	E	L	D	P	F	T	A	S	T	P	L	G	P	V	D	F	G	N	V	V	A	T	L	D	P	R	.	.	.	A	A	R	H	L	T	L	A	C	H	Y	D	S	K	L	F	P	P	G	S	T	P
Template Known Secondary structure					T	T	S																	S	T	T														T	T												S		T	T	.	.	.	S	S																T	T	S
Template Predicted Secondary structure																																																									.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.				.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.							.	.	160	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.
Query Sequence		N	P	Q	I	V	E	N	Y	R	G	G	D	I	A	L	G	I	G	D	E	V	L	S	P	V	M	F	P	V	L	H	Q	L	L	G	Q	T	L	I	T	T	D	G	K	T	L	L	G	A	D	D	K	A	G	I	A	E	I	M	T	A	L	A	V	L	Q	Q	.	.	.	.	.	.	K	K	I	P	H	G	D
Query Conservation																																																																					.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	D	S	A	V	P	C	A	L	L	L	E	L	A	Q	A	L	D	L	E	L	S	R	A	K	K	Q	A	A	P	V	T
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T														T										T	T		S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		181	.	.																																													.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.										.	.	.	.	.	180	.	.	.	.	.													.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	R	V	A	F	T	P	D	E	E	.	.	.	.	.	.	.	.	.	V	G	K	G	A	K	H	F	D	V	D	.	.	.	.	.	.	.	.	.	.	.	.	A	F	D	A	R	W	A	Y	T	V	D	G	G	G	V	G	E	L	E	F	E	N	F	N	A	A	S	V	N	I	K	I	V	G	N	N	V	H
Query Conservation												.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Q	L	L	F	L	D	G	E	E	A	L	K	E	W	G	P	K	D	S	L	Y	G	S	R	H	L	A	Q	L	M	E	S	I	P	H	S	P	G	P	T	R	I	Q	A	I	E	L	F	M	L	L	D	L	L	G	A	P	N	P	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								S			S		S	S			S	T	T	S	S														S	B		S	S		S	B	T	T	T	T									S		S	S	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	T	A	K	G	V	M	V	N	A	L	S	L	A	A	R	I	H	A	E	V	P	A	D	E	S	P	E	M	T	E	G	Y	E	G	F	Y	H	L	A	S	M	K	G	T	V	E	R	A	D	M	H	Y	I	I	R	D	F	D	R	K	Q	F	E	A	R	K	R	K	M	M	E	I	A	K	K	V	G	K
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	Y	S	H	F	P	R	T	V	R	W	F	H	R	L	R	S	I	E	K	R	L	H	R	L	N	L	L	Q	S	H	P	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		B					G	G	G																	T	T			S	S			S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.			.	.	.	380	.
Predicted Secondary structure																																																																											.	.
Query SS confidence																																																																											.	.
Query Sequence		G	L	H	P	D	C	Y	I	E	L	V	I	E	D	S	Y	Y	N	M	R	E	K	V	V	E	H	P	H	I	L	D	I	A	Q	Q	A	M	R	D	C	D	I	E	P	E	L	K	P	I	R	G	G	T	D	G	A	Q	L	S	F	M	G	L	P	C	P	N	L	F	T	G	G	Y	.	.	N	Y	H	G	K
Query Conservation																																																																											.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	M	Y	F	Q	P	G	E	P	F	G	S	V	E	D	D	H	I	P	F	L	R	R	G	V	P	V	L	H	L	I	S	T	P	F	P	A	V	W	H	T	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	B		S	S		S	S				S		T	T					T	T	T									S	S			T	T	T	T	S	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																								312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		382				.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		H	.	.	.	E	F	V	T	L	E	G	M	E	K	A	V	Q	V	I	V	R	I	A	E	L	T
Query Conservation			.	.	.
Alig confidence			.	.	.
Template Conservation
Template Sequence		A	D	T	E	V	N	L	H	P	P	T	V	H	N	L	C	R	I	L	A	V	F	L	A	E	Y
Template Known Secondary structure		T		S	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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